- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x BNI: 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE(Non-covalent)
BNI.2: 14 residues within 4Å:- Chain A: N.12, L.14, S.16, Y.33, W.70, F.72, S.73, S.75, T.77, W.97, L.99, N.118
- Chain C: W.110, K.111
10 PLIP interactions:8 interactions with chain A, 2 interactions with chain C- Hydrophobic interactions: A:W.70, A:W.70, A:F.72, C:W.110, C:W.110
- Hydrogen bonds: A:N.12, A:S.16, A:S.73, A:S.75, A:N.118
BNI.4: 13 residues within 4Å:- Chain B: N.12, L.14, S.16, Y.33, W.70, F.72, S.73, S.75, T.77, W.97, N.118
- Chain D: W.110, K.111
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:W.70, B:W.70, B:F.72
- Hydrogen bonds: B:N.12, B:S.16, B:Y.33, B:S.73, B:S.75, B:N.118
BNI.6: 14 residues within 4Å:- Chain A: W.110, K.111
- Chain C: N.12, L.14, S.16, Y.33, W.70, F.72, S.73, S.75, T.77, W.97, L.99, N.118
10 PLIP interactions:8 interactions with chain C, 2 interactions with chain A- Hydrophobic interactions: C:W.70, C:W.70, C:F.72, A:W.110, A:W.110
- Hydrogen bonds: C:N.12, C:S.16, C:S.73, C:S.75, C:N.118
BNI.8: 13 residues within 4Å:- Chain B: W.110, K.111
- Chain D: N.12, L.14, S.16, Y.33, W.70, F.72, S.73, S.75, T.77, W.97, N.118
9 PLIP interactions:9 interactions with chain D- Hydrophobic interactions: D:W.70, D:W.70, D:F.72
- Hydrogen bonds: D:N.12, D:S.16, D:Y.33, D:S.73, D:S.75, D:N.118
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Huberman, T. et al., Chicken avidin exhibits pseudo-catalytic properties. Biochemical, structural, and electrostatic consequences. J.Biol.Chem. (2001)
- Release Date
- 2001-09-12
- Peptides
- AVIDIN: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x BNI: 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Huberman, T. et al., Chicken avidin exhibits pseudo-catalytic properties. Biochemical, structural, and electrostatic consequences. J.Biol.Chem. (2001)
- Release Date
- 2001-09-12
- Peptides
- AVIDIN: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B