SMTL ID : 1ipe.2 (2 other biounits)

TROPINONE REDUCTASE-II COMPLEXED WITH NADPH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

4 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.1: 29 residues within 4Å: Chain A: G.15, S.17, R.18, G.19, I.20, S.39, R.40, E.44, C.64, D.65, L.66, N.93, A.94, G.95, I.96, I.116, I.143, S.144, S.145, Y.158, K.162, P.188, G.189, V.190, I.191, T.193, S.194, L.195, V.196 25 PLIP interactions: 25 interactions with chain A Hydrophobic interactions: A:P.188 Hydrogen bonds: A:G.15, A:S.17, A:S.17, A:R.18, A:I.20, A:S.39, A:R.40, A:D.65, A:L.66, A:S.67, A:N.93, A:K.162, A:I.191, A:I.191, A:T.193, A:T.193, A:S.194, A:S.194, A:L.195 Water bridges: A:G.21, A:G.21 Salt bridges: A:R.18, A:R.18, A:R.40 NDP.2: 28 residues within 4Å: Chain B: G.15, G.16, S.17, R.18, G.19, I.20, S.39, R.40, C.64, D.65, L.66, N.93, A.94, G.95, I.96, I.116, I.143, S.144, S.145, Y.158, K.162, P.188, G.189, I.191, T.193, S.194, L.195, V.196 25 PLIP interactions: 25 interactions with chain B Hydrophobic interactions: B:P.188 Hydrogen bonds: B:S.17, B:S.17, B:R.18, B:R.18, B:I.20, B:R.40, B:N.41, B:D.65, B:L.66, B:S.67, B:N.93, B:K.162, B:I.191, B:I.191, B:T.193, B:S.194, B:S.194, B:L.195 Water bridges: B:S.39, B:N.93, B:N.93 Salt bridges: B:R.18, B:R.18, B:R.40 NDP.3: 29 residues within 4Å: Chain C: G.15, S.17, R.18, G.19, I.20, S.39, R.40, E.44, C.64, D.65, L.66, N.93, A.94, G.95, I.96, I.116, I.143, S.144, S.145, Y.158, K.162, P.188, G.189, V.190, I.191, T.193, S.194, L.195, V.196 27 PLIP interactions: 27 interactions with chain C Hydrophobic interactions: C:P.188 Hydrogen bonds: C:G.15, C:S.17, C:S.17, C:R.18, C:I.20, C:S.39, C:R.40, C:D.65, C:D.65, C:L.66, C:S.67, C:N.93, C:Y.158, C:K.162, C:I.191, C:I.191, C:T.193, C:T.193, C:S.194, C:S.194, C:L.195 Water bridges: C:G.21, C:G.21 Salt bridges: C:R.18, C:R.18, C:R.40 NDP.4: 28 residues within 4Å: Chain D: G.15, G.16, S.17, R.18, G.19, I.20, S.39, R.40, C.64, D.65, L.66, N.93, A.94, G.95, I.96, I.116, I.143, S.144, S.145, Y.158, K.162, P.188, G.189, I.191, T.193, S.194, L.195, V.196 26 PLIP interactions: 26 interactions with chain D Hydrophobic interactions: D:P.188 Hydrogen bonds: D:S.17, D:S.17, D:R.18, D:R.18, D:I.20, D:R.40, D:N.41, D:D.65, D:D.65, D:L.66, D:S.67, D:N.93, D:Y.158, D:K.162, D:I.191, D:I.191, D:S.194, D:S.194, D:L.195 Water bridges: D:S.39, D:N.93, D:N.93 Salt bridges: D:R.18, D:R.18, D:R.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamashita, A. et al., Capturing Enzyme Structure Prior to Reaction Initiation: Tropinone Reductase-II-Substrate Complexes. BIOCHEMISTRY (2003)

Release Date

2003-06-03

Peptides

TROPINONE REDUCTASE-II: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

TROPINONE REDUCTASE-II

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