SMTL ID : 1ish.1

Crystal Structure Analysis of BST-1/CD157 complexed with ethenoNADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 9 residues within 4Å: Chain A: N.79, S.80, L.83, N.160, S.162, E.163, P.164, E.197, P.201 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:P.201 NAG-NAG.2: 9 residues within 4Å: Chain B: N.79, S.80, L.83, N.160, S.162, E.163, P.164, E.197, P.201 No protein-ligand interaction detected (PLIP)

2 x ENP: ETHENO-NADP(Non-covalent)

ENP.3: 16 residues within 4Å: Chain A: F.76, W.77, E.78, H.81, L.97, A.106, D.107, F.108, L.109, W.111, V.136, W.140, S.144, F.173, F.174, E.178 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:W.77, A:W.77, A:A.106, A:F.108, A:F.108, A:L.109, A:F.173 Water bridges: A:W.77, A:H.81, A:S.98 pi-Stacking: A:W.77, A:W.140, A:W.140, A:W.140, A:F.173, A:F.173 ENP.4: 16 residues within 4Å: Chain B: F.76, W.77, E.78, H.81, L.97, A.106, D.107, F.108, L.109, W.111, V.136, W.140, S.144, F.173, F.174, E.178 16 PLIP interactions: 16 interactions with chain B Hydrogen bonds: B:W.77, B:W.77, B:A.106, B:F.108, B:F.108, B:L.109, B:F.173 Water bridges: B:N.79, B:L.97, B:S.98 pi-Stacking: B:W.77, B:W.140, B:W.140, B:W.140, B:F.173, B:F.173

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamamoto-Katayama, S. et al., Crystallographic studies on human BST-1/CD157 with ADP-ribosyl cyclase and NAD glycohydrolase activities. J.Mol.Biol. (2002)

Release Date

2002-03-13

Peptides

bone marrow stromal cell antigen 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

bone marrow stromal cell antigen 1

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