SMTL ID : 1isj.1

Crystal Structure Analysis of BST-1/CD157 complexed with NMN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 9 residues within 4Å: Chain A: N.79, S.80, L.83, N.160, S.162, E.163, P.164, E.197, P.201 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:P.201 NAG-NAG.2: 9 residues within 4Å: Chain B: N.79, S.80, L.83, N.160, S.162, E.163, P.164, E.197, P.201 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:P.201

2 x NMN: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE(Non-covalent)

NMN.3: 10 residues within 4Å: Chain A: F.76, W.77, E.78, H.81, L.97, S.98, D.107, W.140, F.173, E.178 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:W.77, A:W.140 Hydrogen bonds: A:W.77, A:W.77, A:D.107, A:F.173 Water bridges: A:W.77, A:E.78, A:E.78, A:S.98, A:F.108 pi-Stacking: A:W.140 NMN.4: 11 residues within 4Å: Chain B: F.76, W.77, E.78, H.81, L.97, S.98, D.107, W.140, S.144, F.173, E.178 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:W.77, B:W.140, B:W.140, B:W.140 Hydrogen bonds: B:W.77, B:W.77, B:D.107, B:S.144 Water bridges: B:W.77, B:E.78, B:N.79, B:S.98, B:F.108, B:F.173, B:F.173

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamamoto-Katayama, S. et al., Crystallographic studies on human BST-1/CD157 with ADP-ribosyl cyclase and NAD glycohydrolase activities. J.Mol.Biol. (2002)

Release Date

2002-03-13

Peptides

bone marrow stromal cell antigen 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

bone marrow stromal cell antigen 1

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