- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 16 x CL: CHLORIDE ION(Non-functional Binders)
CL.5: 5 residues within 4Å:- Chain A: S.212, V.219, N.220, P.224, N.236
Ligand excluded by PLIPCL.6: 3 residues within 4Å:- Chain A: A.611, S.612
- Chain B: G.44
Ligand excluded by PLIPCL.7: 5 residues within 4Å:- Chain A: V.581, D.582, G.583, L.600, N.603
Ligand excluded by PLIPCL.8: 5 residues within 4Å:- Chain A: Y.329, E.330, W.331, K.376, R.377
Ligand excluded by PLIPCL.9: 4 residues within 4Å:- Chain A: T.569, D.570, A.571, P.572
Ligand excluded by PLIPCL.10: 4 residues within 4Å:- Chain A: N.186, W.187
- Chain B: P.20, K.21
Ligand excluded by PLIPCL.11: 4 residues within 4Å:- Chain A: V.46, E.47, Q.145
- Chain B: K.710
Ligand excluded by PLIPCL.12: 4 residues within 4Å:- Chain A: P.20, K.21
- Chain B: N.186, W.187
Ligand excluded by PLIPCL.13: 3 residues within 4Å:- Chain A: L.490, E.491, P.566
Ligand excluded by PLIPCL.14: 3 residues within 4Å:- Chain A: G.481, R.487, F.574
Ligand excluded by PLIPCL.15: 4 residues within 4Å:- Chain A: G.108, R.114, I.120, W.187
Ligand excluded by PLIPCL.16: 3 residues within 4Å:- Chain A: V.213, N.220, D.225
Ligand excluded by PLIPCL.21: 4 residues within 4Å:- Chain A: V.43, G.44
- Chain B: A.611, S.612
Ligand excluded by PLIPCL.22: 4 residues within 4Å:- Chain A: K.710
- Chain B: V.46, E.47, Q.145
Ligand excluded by PLIPCL.23: 3 residues within 4Å:- Chain B: G.108, R.114, I.120
Ligand excluded by PLIPCL.24: 4 residues within 4Å:- Chain B: V.581, D.582, G.583, N.603
Ligand excluded by PLIP- 6 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)
UNX.17: 3 residues within 4Å:- Chain A: K.401, M.427, W.429
No protein-ligand interaction detected (PLIP)UNX.25: 5 residues within 4Å:- Chain B: S.212, V.219, N.220, P.224, N.236
No protein-ligand interaction detected (PLIP)UNX.26: 3 residues within 4Å:- Chain B: G.481, R.487, F.574
No protein-ligand interaction detected (PLIP)UNX.27: 5 residues within 4Å:- Chain B: Y.329, E.330, W.331, K.376, R.377
No protein-ligand interaction detected (PLIP)UNX.28: 3 residues within 4Å:- Chain B: V.213, N.220, D.225
No protein-ligand interaction detected (PLIP)UNX.29: 2 residues within 4Å:- Chain B: M.427, W.429
No protein-ligand interaction detected (PLIP)- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.18: 25 residues within 4Å:- Chain A: P.88, L.89, I.91, R.92, W.95, V.219, P.221, I.237, F.241, L.254, I.255, G.258, H.259, F.261, G.262, K.263, V.264, H.265, T.304, S.305, W.311, L.369, T.371, F.399, W.403
28 PLIP interactions:27 interactions with chain A, 1 Ligand-Water interactions- Hydrophobic interactions: A:I.91, A:R.92, A:W.95, A:W.95, A:W.95, A:I.237, A:F.241, A:L.254, A:I.255, A:V.264, A:W.311, A:W.311, A:T.371, A:F.399, A:W.403
- Hydrogen bonds: A:K.263, A:H.265, A:T.304, A:S.305
- Water bridges: A:R.92, A:N.128, A:H.265
- Salt bridges: A:R.92, A:H.265, A:H.265
- pi-Stacking: A:W.95
- Metal complexes: A:H.259, H2O.25
HEM.30: 25 residues within 4Å:- Chain B: P.88, L.89, I.91, R.92, W.95, V.219, P.221, I.237, F.241, L.254, I.255, G.258, H.259, F.261, G.262, K.263, V.264, H.265, T.304, S.305, W.311, L.369, T.371, F.399, W.403
30 PLIP interactions:30 interactions with chain B,- Hydrophobic interactions: B:I.91, B:R.92, B:W.95, B:W.95, B:I.237, B:F.241, B:L.254, B:I.255, B:V.264, B:W.311, B:W.311, B:L.369, B:T.371, B:F.399, B:W.403
- Hydrogen bonds: B:K.263, B:H.265, B:T.304, B:S.305
- Water bridges: B:D.82, B:D.82, B:R.92, B:R.92, B:H.265, B:H.265
- Salt bridges: B:R.92, B:H.265, B:H.265
- pi-Stacking: B:W.95
- Metal complexes: B:H.259
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yamada, Y. et al., The 2.0 A crystal structure of catalase-peroxidase from Haloarcula marismortui. Nat.Struct.Biol. (2002)
- Release Date
- 2002-08-28
- Peptides
- catalase-peroxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 16 x CL: CHLORIDE ION(Non-functional Binders)
- 6 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yamada, Y. et al., The 2.0 A crystal structure of catalase-peroxidase from Haloarcula marismortui. Nat.Struct.Biol. (2002)
- Release Date
- 2002-08-28
- Peptides
- catalase-peroxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B