- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x ZN: ZINC ION(Non-covalent)
ZN.3: 7 residues within 4Å:- Chain A: H.20, D.22, S.66, E.125, D.288
- Ligands: ZN.4, CIL.5
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:H.20, A:D.22, A:D.22, A:E.125, H2O.1
ZN.4: 7 residues within 4Å:- Chain A: H.20, E.125, H.198, H.219, R.230
- Ligands: ZN.3, CIL.5
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:E.125, A:H.198, A:H.219, H2O.1
ZN.8: 8 residues within 4Å:- Chain B: H.20, D.22, S.66, E.125, H.219, D.288
- Ligands: ZN.9, CIL.10
4 PLIP interactions:3 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:H.20, B:D.22, B:E.125, H2O.14
ZN.9: 7 residues within 4Å:- Chain B: H.20, E.125, H.198, H.219, R.230
- Ligands: ZN.8, CIL.10
4 PLIP interactions:3 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:E.125, B:H.198, B:H.219, H2O.14
- 2 x CIL: CILASTATIN(Non-covalent)
CIL.5: 17 residues within 4Å:- Chain A: D.22, W.25, Y.68, E.125, H.152, H.198, H.219, R.230, N.250, Y.252, Y.255, D.288, G.291, V.292, P.293
- Ligands: ZN.3, ZN.4
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:Y.68, A:Y.252, A:V.292
- Hydrogen bonds: A:N.250, A:Y.255, A:G.291
- Salt bridges: A:H.198, A:H.219, A:R.230
CIL.10: 16 residues within 4Å:- Chain B: D.22, W.25, Y.68, E.125, H.152, H.198, H.219, R.230, Y.252, Y.255, D.288, G.291, V.292, P.293
- Ligands: ZN.8, ZN.9
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:Y.68, B:Y.252, B:V.292
- Hydrogen bonds: B:N.250, B:Y.255, B:Y.255, B:G.291
- Salt bridges: B:H.198, B:H.219, B:R.230
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nitanai, Y. et al., Crystal Structure of Human Renal Dipeptidase Involved in beta-Lactam Hydrolysis. J.Mol.Biol. (2002)
- Release Date
- 2002-08-28
- Peptides
- RENAL DIPEPTIDASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x ZN: ZINC ION(Non-covalent)
- 2 x CIL: CILASTATIN(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nitanai, Y. et al., Crystal Structure of Human Renal Dipeptidase Involved in beta-Lactam Hydrolysis. J.Mol.Biol. (2002)
- Release Date
- 2002-08-28
- Peptides
- RENAL DIPEPTIDASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B