SMTL ID : 1itx.1

Catalytic Domain of Chitinase A1 from Bacillus circulans WL-12

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

monomer

Ligands

11 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: W.50, I.53, G.55, P.57, N.136, R.137 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.136, A:R.137 Water bridges: A:G.55 GOL.2: 4 residues within 4Å: Chain A: R.355, W.357, E.381 Ligands: GOL.11 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.355, A:R.355 Water bridges: A:R.355, A:W.357, A:E.381 GOL.3: 2 residues within 4Å: Chain A: D.359, K.362 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.359, A:K.362 Water bridges: A:Y.385 GOL.4: 5 residues within 4Å: Chain A: D.311, G.312, N.371, K.372, R.373 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.311, A:G.312, A:K.372, A:R.373, A:R.373 Water bridges: A:D.311 GOL.5: 3 residues within 4Å: Chain A: N.27, N.29, D.32 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.29, A:N.29 Water bridges: A:D.32 GOL.6: 4 residues within 4Å: Chain A: N.51, N.78, P.80, N.81 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.51, A:N.81, A:N.81 Water bridges: A:G.52 GOL.7: 9 residues within 4Å: Chain A: Y.17, F.45, G.131, D.170, E.172, A.219, M.245, Y.247, W.401 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.170, A:E.172 Water bridges: A:E.172 GOL.8: 8 residues within 4Å: Chain A: G.221, A.222, S.223, M.245, Y.247, D.248, F.249, F.280 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:A.222, A:M.245 Water bridges: A:S.223, A:S.223, A:D.248 GOL.9: 1 residues within 4Å: Chain A: Q.315 No protein-ligand interaction detected (PLIP) GOL.10: 4 residues within 4Å: Chain A: N.163, D.210, G.211, K.212 5 PLIP interactions: 5 interactions with chain A Water bridges: A:N.163, A:N.163, A:D.210, A:K.212, A:Y.214 GOL.11: 4 residues within 4Å: Chain A: R.355, Y.356, W.357 Ligands: GOL.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.357 Water bridges: A:R.355

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matsumoto, T. et al., Three-dimensional structure of the catalytic domain of chitinase A1 from Bacillus circulans WL-12 at a very high resolution. PROC.JPN.ACAD.,SER.B (1999)

Release Date

2002-03-13

Peptides

Glycosyl Hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glycosyl Hydrolase