SMTL ID : 1iuq.1

The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: F.79, S.82, H.84, H.85 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.82, A:S.82, A:S.82 Water bridges: A:K.86, A:K.86 Salt bridges: A:H.85 SO4.2: 7 residues within 4Å: Chain A: K.192, H.193, G.233, R.234, R.236 Ligands: SO4.4, GOL.10 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.234, A:R.234 Salt bridges: A:K.192, A:H.193, A:R.234, A:R.236 SO4.3: 3 residues within 4Å: Chain A: S.2, H.3, R.5 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.3 Salt bridges: A:R.5 SO4.4: 6 residues within 4Å: Chain A: K.192, S.231, G.233, R.234, A.247 Ligands: SO4.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.233 Salt bridges: A:K.192 SO4.5: 4 residues within 4Å: Chain A: I.310, S.311, F.312, E.313 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:I.310, A:F.312, A:E.313, A:E.313

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.6: 3 residues within 4Å: Chain A: S.62, N.63, N.100 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.62 Water bridges: A:S.62, A:N.63, A:N.63 GOL.7: 6 residues within 4Å: Chain A: L.73, D.74, D.77, F.79, Y.94, I.181 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.77 Water bridges: A:R.70 GOL.8: 4 residues within 4Å: Chain A: H.84, K.86, L.218, Q.224 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.86, A:K.86 Water bridges: A:Q.224, A:Q.224, A:Q.224 GOL.9: 7 residues within 4Å: Chain A: P.248, F.249, A.251, E.327, S.330, K.331, F.334 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:F.249, A:S.330, A:S.330 GOL.10: 5 residues within 4Å: Chain A: E.141, D.168, R.169, H.193 Ligands: SO4.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.141, A:R.169 Water bridges: A:V.170 GOL.11: 3 residues within 4Å: Chain A: Y.245, F.334, A.338 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tamada, T. et al., Substrate recognition and selectivity of plant glycerol-3-phosphate acyltransferases (GPATs) from Cucurbita moscata and Spinacea oleracea. Acta Crystallogr.,Sect.D (2004)

Release Date

2003-10-07

Peptides

Glycerol-3-Phosphate Acyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glycerol-3-Phosphate Acyltransferase