SMTL ID : 1ivl.1

THE DE NOVO DESIGN OF AN ANTIBODY COMBINING SITE: CRYSTALLOGRAPHIC ANALYSIS OF THE VL DOMAIN CONFIRMS THE STRUCTURAL MODEL

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.17 Å

Oligo State

homo-dimer

Ligands

1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.1: 9 residues within 4Å: Chain A: Y.36, Q.38, P.44, F.87, F.98 Chain B: Y.36, P.44, Q.89, F.98 8 PLIP interactions: 3 interactions with chain B, 5 interactions with chain A Hydrophobic interactions: B:P.44, A:Y.36, A:P.44, A:F.87, A:F.98 Hydrogen bonds: B:Y.36, B:Q.89, A:Q.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Essen, L.O. et al., The de novo design of an antibody combining site. Crystallographic analysis of the VL domain confirms the structural model. J.Mol.Biol. (1994)

Release Date

1994-08-31

Peptides

IGG-KAPPA M29B FV (LIGHT CHAIN): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

IGG-KAPPA M29B FV (LIGHT CHAIN)