SMTL ID : 1ivq.1

THE CRYSTALLOGRAPHIC STRUCTURE OF THE PROTEASE FROM HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 WITH TWO SYNTHETIC PEPTIDIC TRANSITION STATE ANALOG INHIBITORS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

1 x 0PX: N~1~-{(1S,2S,4S)-1-(cyclohexylmethyl)-4-[(2,2-dimethylpropyl)carbamoyl]-2-hydroxy-5-methylhexyl}-N~2~-(quinolin-2-ylcar bonyl)-L-aspartamide(Non-covalent)

0PX.1: 26 residues within 4Å: Chain A: L.23, D.25, G.27, A.28, D.29, D.30, I.32, G.48, G.49, I.50, F.53, I.82, I.84 Chain B: R.8, D.25, G.27, A.28, D.30, I.32, V.47, G.48, G.49, T.80, P.81, I.82, I.84 20 PLIP interactions: 13 interactions with chain A, 7 interactions with chain B Hydrophobic interactions: A:L.23, A:A.28, A:I.50, A:I.50, A:I.50, A:F.53, A:I.82, A:I.84, B:A.28, B:I.32, B:V.47, B:P.81, B:I.82, B:I.84 Hydrogen bonds: A:G.27, A:D.29, A:D.30, A:G.48, A:G.48, B:D.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mulichak, A.M. et al., The crystallographic structure of the protease from human immunodeficiency virus type 2 with two synthetic peptidic transition state analog inhibitors. J.Biol.Chem. (1993)

Release Date

1993-07-15

Peptides

HIV-2 PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-2 PROTEASE

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