SMTL ID : 1ivs.2 (1 other biounit)

CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS VALYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(VAL) AND VALYL-ADENYLATE ANALOGUE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x VAA: N-[VALINYL]-N'-[ADENOSYL]-DIAMINOSUFONE(Non-covalent)

VAA.1: 21 residues within 4Å: Chain B: P.41, P.42, P.43, N.44, H.50, G.52, H.53, D.56, D.81, W.456, S.459, T.487, G.488, D.490, I.491, W.495, H.518, G.519, L.520, V.521, M.529 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:P.41, B:W.456, B:I.491, B:W.495 Hydrogen bonds: B:P.42, B:N.44, B:N.44, B:D.81, B:D.81, B:G.488, B:D.490, B:V.521, B:V.521, B:M.529

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fukai, S. et al., Mechanism of molecular interactions for tRNA(Val) recognition by valyl-tRNA synthetase. RNA (2003)

Release Date

2003-02-11

Peptides

Valyl-tRNA synthetase: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
B

Valyl-tRNA synthetase

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