- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- hetero-oligomer
- Ligands
- 2 x B12: COBALAMIN(Non-covalent)
- 6 x K: POTASSIUM ION(Non-covalent)
K.3: 5 residues within 4Å:- Chain C: Q.141, E.170, E.221, Q.296, S.362
5 PLIP interactions:3 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: C:E.170, C:E.221, C:S.362, H2O.144, H2O.145
K.4: 5 residues within 4Å:- Chain C: G.261, S.264, E.265, E.280, C.283
4 PLIP interactions:4 interactions with chain C- Metal complexes: C:G.261, C:S.264, C:E.265, C:E.280
K.5: 5 residues within 4Å:- Chain C: L.203, E.205, E.208, T.222, I.223
5 PLIP interactions:5 interactions with chain C- Metal complexes: C:L.203, C:E.205, C:E.208, C:T.222, C:T.222
K.6: 5 residues within 4Å:- Chain E: Q.141, E.170, E.221, Q.296, S.362
5 PLIP interactions:3 interactions with chain E, 2 Ligand-Water interactions- Metal complexes: E:E.170, E:E.221, E:S.362, H2O.549, H2O.550
K.7: 5 residues within 4Å:- Chain E: G.261, S.264, E.265, E.280, C.283
5 PLIP interactions:3 interactions with chain E, 2 Ligand-Water interactions- Metal complexes: E:G.261, E:S.264, E:E.280, H2O.553, H2O.620
K.8: 4 residues within 4Å:- Chain E: L.203, E.205, E.208, T.222
5 PLIP interactions:5 interactions with chain E- Metal complexes: E:L.203, E:E.205, E:E.208, E:T.222, E:T.222
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
-
Shibata, N. et al., Substrate-induced conformational change of a coenzyme B12-dependent enzyme: crystal structure of the substrate-free form of diol dehydratase. Biochemistry (2002)
- Release Date
- 2003-05-01
- Peptides
- DIOL DEHYDRATASE beta chain: AB
DIOL DEHYDRATASE alpha chain: CE
DIOL DEHYDRATASE gamma chain: DF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
EC
AE
LD
GF
M
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- hetero-oligomer
- Ligands
- 2 x B12: COBALAMIN(Non-covalent)
- 6 x K: POTASSIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
-
Shibata, N. et al., Substrate-induced conformational change of a coenzyme B12-dependent enzyme: crystal structure of the substrate-free form of diol dehydratase. Biochemistry (2002)
- Release Date
- 2003-05-01
- Peptides
- DIOL DEHYDRATASE beta chain: AB
DIOL DEHYDRATASE alpha chain: CE
DIOL DEHYDRATASE gamma chain: DF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
EC
AE
LD
GF
M