SMTL ID : 1ixr.1

RuvA-RuvB complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

hetero-8-4-mer

Ligands

4 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 11 residues within 4Å: Chain C: R.7, Y.14, I.15, G.48, G.50, K.51, T.52, T.53, M.204, R.205, K.208 9 PLIP interactions: 9 interactions with chain C Hydrogen bonds: C:R.7, C:I.15, C:G.48, C:G.50, C:K.51, C:T.52, C:T.52, C:T.53 pi-Cation interactions: C:R.7 ANP.2: 11 residues within 4Å: Chain F: R.7, Y.14, I.15, G.48, G.50, K.51, T.52, T.53, M.204, R.205, K.208 9 PLIP interactions: 9 interactions with chain F Hydrogen bonds: F:R.7, F:I.15, F:G.48, F:G.50, F:K.51, F:T.52, F:T.52, F:T.53 pi-Cation interactions: F:R.7 ANP.3: 11 residues within 4Å: Chain I: R.7, Y.14, I.15, G.48, G.50, K.51, T.52, T.53, M.204, R.205, K.208 9 PLIP interactions: 9 interactions with chain I Hydrogen bonds: I:R.7, I:I.15, I:G.48, I:G.50, I:K.51, I:T.52, I:T.53, I:T.53 pi-Cation interactions: I:R.7 ANP.4: 11 residues within 4Å: Chain L: R.7, Y.14, I.15, G.48, G.50, K.51, T.52, T.53, M.204, R.205, K.208 9 PLIP interactions: 9 interactions with chain L Hydrogen bonds: L:R.7, L:I.15, L:G.48, L:G.50, L:K.51, L:T.52, L:T.53, L:T.53 pi-Cation interactions: L:R.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamada, K. et al., Crystal Structure of the RuvA-RuvB Complex: A Structural Basis for the Holliday Junction Migrating Motor Machinery. Mol.Cell (2002)

Release Date

2002-11-06

Peptides

Holliday junction DNA helicase ruvA: ABDEGHJK
RuvB: CFIL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

D
A

E
B

G
A

H
B

J
A

K
B

C
C

F
C

I
C

L
C

Holliday junction DNA helicase ruvA

RuvB