SMTL ID : 1j0e.1 (1 other biounit)

ACC deaminase mutant reacton intermediate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

homo-dimer

Ligands

2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 17 residues within 4Å: Chain A: N.50, K.51, K.54, N.79, S.166, C.199, C.200, V.201, T.202, G.203, S.204, T.205, F.295, E.296, L.323, G.324 Ligands: 1AC.2 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:K.51, A:F.295, A:E.296 Hydrogen bonds: A:N.79, A:S.166, A:V.201, A:T.202, A:G.203, A:T.205, A:T.205, A:T.205 Water bridges: A:N.50, A:T.206, A:T.206, A:L.323 Salt bridges: A:K.51, A:K.54 pi-Stacking: A:F.295 PLP.3: 18 residues within 4Å: Chain B: N.50, K.51, K.54, N.79, S.166, C.199, C.200, V.201, T.202, G.203, S.204, T.205, F.295, E.296, L.323, G.324, G.325 Ligands: 1AC.4 18 PLIP interactions: 18 interactions with chain B Hydrophobic interactions: B:K.51, B:E.296, B:L.323 Hydrogen bonds: B:N.50, B:N.79, B:S.166, B:V.201, B:T.202, B:G.203, B:T.205, B:T.205, B:T.205 Water bridges: B:N.50, B:T.206, B:L.323 Salt bridges: B:K.51, B:K.54 pi-Stacking: B:F.295

2 x 1AC: 1-AMINOCYCLOPROPANECARBOXYLIC ACID(Non-covalent)

1AC.2: 7 residues within 4Å: Chain A: K.51, S.78, N.79, Q.80, W.102, F.295 Ligands: PLP.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:N.79, A:Q.80, A:F.295 Hydrogen bonds: A:K.51, A:N.79, A:Q.80 Water bridges: A:S.78 1AC.4: 8 residues within 4Å: Chain B: K.51, S.78, N.79, Q.80, W.102, Y.269, F.295 Ligands: PLP.3 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:N.79, B:Q.80, B:F.295 Hydrogen bonds: B:K.51, B:G.75, B:N.79, B:Q.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ose, T. et al., Reaction intermediate structures of 1-aminocyclopropane-1-carboxylate deaminase: insight into PLP-dependent cyclopropane ring-opening reaction. J.BIOL.CHEM. (2003)

Release Date

2003-05-12

Peptides

1-aminocyclopropane-1-carboxylate deaminase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

1-aminocyclopropane-1-carboxylate deaminase

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