SMTL ID : 1j2b.1

Crystal Structure Of Archaeosine tRNA-Guanine Transglycosylase Complexed With lambda-form tRNA(Val)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain C: Y.262, C.279, C.281, C.284, H.307 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.279, C:C.281, C:C.284, C:H.307 ZN.4: 4 residues within 4Å: Chain D: C.279, C.281, C.284, H.307 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.279, D:C.281, D:C.284, D:H.307

4 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 8 residues within 4Å: Chain C: A.528, K.529, V.531, M.566, I.567, V.568, F.569, Q.570 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:A.528, C:M.566, C:F.569 MG.3: 3 residues within 4Å: Chain B: C.72, C.73 Chain D: R.573 No protein-ligand interaction detected (PLIP) MG.5: 7 residues within 4Å: Chain D: A.528, K.529, V.531, M.566, I.567, F.569, Q.570 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:A.528 MG.6: 2 residues within 4Å: Chain A: C.72 Chain C: R.573 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ishitani, R. et al., Alternative Tertiary Structure of tRNA for Recognition by a Posttranscriptional Modification Enzyme. Cell(Cambridge,Mass.) (2003)

Release Date

2003-05-27

Peptides

Archaeosine tRNA-guanine transglycosylase: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

D
B

Archaeosine tRNA-guanine transglycosylase

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