SMTL ID : 1j32.1

Aspartate Aminotransferase from Phormidium lapideum

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 14 residues within 4Å: Chain A: G.98, G.99, K.100, W.124, Y.127, N.170, N.174, D.202, I.204, Y.205, A.236, K.237, R.245 Chain B: Y.63 15 PLIP interactions: 13 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:W.124, A:N.174, A:I.204, A:K.237 Hydrogen bonds: A:G.99, A:K.100, A:N.174, A:Y.205, B:Y.63 Water bridges: A:R.245, B:S.268 Salt bridges: A:K.237, A:R.245 pi-Stacking: A:W.124, A:W.124 PLP.2: 14 residues within 4Å: Chain A: Y.63 Chain B: G.98, G.99, K.100, W.124, Y.127, N.170, N.174, D.202, I.204, Y.205, A.236, K.237, R.245 13 PLIP interactions: 12 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:W.124, B:N.174, B:Y.205 Hydrogen bonds: B:G.99, B:K.100, B:N.174, B:Y.205 Water bridges: B:R.245, A:Y.63 Salt bridges: B:K.237, B:R.245 pi-Stacking: B:W.124, B:W.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, H. et al., Structural studies of aspartate aminotransferase from Phormidium lapideum. To be Published

Release Date

2003-02-04

Peptides

aspartate aminotransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

aspartate aminotransferase