SMTL ID : 1j3w.2 (1 other biounit)

Structure of Gliding protein-mglB from Thermus Thermophilus HB8

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-octamer

Ligands

4 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.1: 9 residues within 4Å: Chain A: R.124 Chain G: R.25, E.26, T.27, G.28, W.49, T.112, P.114, K.117 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain G Salt bridges: A:R.124 Hydrogen bonds: G:R.25 MES.4: 9 residues within 4Å: Chain C: R.124 Chain E: R.25, E.26, T.27, G.28, W.49, T.112, P.114, K.117 2 PLIP interactions: 1 interactions with chain C, 1 interactions with chain E Salt bridges: C:R.124 Hydrogen bonds: E:R.25 MES.8: 9 residues within 4Å: Chain E: L.120, R.124 Chain H: R.25, E.26, T.27, G.28, W.49, P.114, K.117 2 PLIP interactions: 1 interactions with chain H, 1 interactions with chain E Hydrogen bonds: H:R.25 Salt bridges: E:R.124 MES.10: 9 residues within 4Å: Chain F: R.25, E.26, T.27, G.28, W.49, P.114, K.117 Chain G: L.120, R.124 2 PLIP interactions: 1 interactions with chain F, 1 interactions with chain G Hydrogen bonds: F:R.25 Salt bridges: G:R.124

2 x MG: MAGNESIUM ION(Non-functional Binders)

MG.2: 1 residues within 4Å: Ligands: MG.5 No protein-ligand interaction detected (PLIP) MG.5: 1 residues within 4Å: Ligands: MG.2 No protein-ligand interaction detected (PLIP)

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain B: R.37, E.101, H.102 2 PLIP interactions: 2 interactions with chain B Water bridges: B:R.37 Salt bridges: B:H.102 SO4.6: 3 residues within 4Å: Chain D: R.37, E.101, H.102 2 PLIP interactions: 2 interactions with chain D Water bridges: D:R.37 Salt bridges: D:H.102 SO4.7: 3 residues within 4Å: Chain E: A.47, L.48, W.49 2 PLIP interactions: 2 interactions with chain E Hydrogen bonds: E:L.48, E:W.49 SO4.9: 3 residues within 4Å: Chain G: A.47, L.48, W.49 2 PLIP interactions: 2 interactions with chain G Hydrogen bonds: G:L.48, G:W.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lokanath, N.K. et al., Structure of Gliding protein-mglB from Thermus THermophilus HB8. To be Published

Release Date

2004-04-13

Peptides

Giding protein-mglB: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
C

D
D

E
A

F
B

G
A

H
B

Giding protein-mglB

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