SMTL ID : 1j59.1

CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x CMP: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE(Non-covalent)

CMP.1: 15 residues within 4Å: Chain E: I.30, A.36, V.49, L.61, S.62, G.71, E.72, L.73, R.82, S.83, V.86, R.123, T.127 Chain F: L.124, S.128 7 PLIP interactions: 5 interactions with chain E, 2 interactions with chain F Hydrophobic interactions: E:L.73 Hydrogen bonds: E:L.73, E:S.83, E:R.123, F:S.128, F:S.128 Salt bridges: E:R.82 CMP.2: 11 residues within 4Å: Chain E: L.124, S.128 Chain F: V.49, G.71, E.72, L.73, R.82, S.83, A.84, R.123, T.127 10 PLIP interactions: 8 interactions with chain F, 2 interactions with chain E Hydrophobic interactions: F:L.73 Hydrogen bonds: F:L.73, F:S.83, F:S.83, F:A.84, F:T.127, E:S.128, E:S.128 Water bridges: F:S.62 Salt bridges: F:R.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Parkinson, G. et al., Structure of the CAP-DNA complex at 2.5 angstroms resolution: a complete picture of the protein-DNA interface. J.Mol.Biol. (1996)

Release Date

2002-03-01

Peptides

CATABOLITE GENE ACTIVATOR PROTEIN (CAP): EF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

E
A

F
B

CATABOLITE GENE ACTIVATOR PROTEIN (CAP)

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