SMTL ID : 1j5y.2 (1 other biounit)

Crystal structure of transcriptional regulator (TM1602) from Thermotoga maritima at 2.3 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

4 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 5 residues within 4Å: Chain A: V.89, H.91, E.99, H.158, H.160 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.91, A:E.99, A:H.158, A:H.160, H2O.2 NI.3: 5 residues within 4Å: Chain B: V.89, H.91, E.99, H.158, H.160 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.91, B:E.99, B:H.158, B:H.160, H2O.6 NI.5: 5 residues within 4Å: Chain C: V.89, H.91, E.99, H.158, H.160 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.91, C:E.99, C:H.158, C:H.160, H2O.9 NI.7: 5 residues within 4Å: Chain D: V.89, H.91, E.99, H.158, H.160 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:H.91, D:E.99, D:H.158, D:H.160, H2O.13

4 x K: POTASSIUM ION(Non-covalent)

K.2: 6 residues within 4Å: Chain A: L.30, E.31, S.33, L.76, A.77, G.78 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:L.30, A:S.33, A:L.76 K.4: 6 residues within 4Å: Chain B: L.30, E.31, S.33, L.76, A.77, G.78 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:L.30, B:S.33, B:L.76 K.6: 6 residues within 4Å: Chain C: L.30, E.31, S.33, L.76, A.77, G.78 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:L.30, C:S.33, C:L.76 K.8: 6 residues within 4Å: Chain D: L.30, E.31, S.33, L.76, A.77, G.78 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:L.30, D:S.33, D:L.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weekes, D. et al., Crystal structure of a transcription regulator (TM1602) from Thermotoga maritima at 2.3 A resolution. Proteins (2007)

Release Date

2002-07-31

Peptides

TRANSCRIPTIONAL REGULATOR, BIOTIN REPRESSOR FAMILY: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

TRANSCRIPTIONAL REGULATOR, BIOTIN REPRESSOR FAMILY

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