SMTL ID : 1jf9.1

Crystal Structure of selenocysteine lyase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 13 residues within 4Å: Chain A: T.96, T.97, H.125, A.127, N.177, D.202, A.204, Q.205, S.225, H.227, K.228 Chain B: G.279, T.280 15 PLIP interactions: 13 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:A.204, A:K.228 Hydrogen bonds: A:T.97, A:T.97, A:T.97, A:Q.205, A:S.225, A:S.225, B:T.280, B:T.280 Water bridges: A:E.98, A:N.177 Salt bridges: A:H.227, A:K.228 pi-Stacking: A:H.125 PLP.2: 13 residues within 4Å: Chain A: G.279, T.280 Chain B: T.96, T.97, H.125, A.127, N.177, D.202, A.204, Q.205, S.225, H.227, K.228 15 PLIP interactions: 14 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:A.204, B:K.228 Hydrogen bonds: B:T.97, B:T.97, B:T.97, B:Q.205, B:S.225, B:S.225, B:K.228, A:T.280 Water bridges: B:E.98, B:N.177 Salt bridges: B:H.227, B:K.228 pi-Stacking: B:H.125

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lima, C.D., Analysis of the E. coli NifS CsdB Protein at 2.0A Reveals the Structural Basis for Perselenide and Persulfide Intermediate Formation. J.Mol.Biol. (2002)

Release Date

2001-07-04

Peptides

SELENOCYSTEINE LYASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

SELENOCYSTEINE LYASE