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SMTL ID : 1jf9.1
Crystal Structure of selenocysteine lyase
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.00 Å
Oligo State
homo-dimer
Ligands
2 x
PLP
:
PYRIDOXAL-5'-PHOSPHATE
(Covalent)
PLP.1:
13 residues within 4Å:
Chain A:
T.96
,
T.97
,
H.125
,
A.127
,
N.177
,
D.202
,
A.204
,
Q.205
,
S.225
,
H.227
,
K.228
Chain B:
G.279
,
T.280
15
PLIP interactions
:
13 interactions with chain A
,
2 interactions with chain B
Hydrophobic interactions:
A:A.204
,
A:K.228
Hydrogen bonds:
A:T.97
,
A:T.97
,
A:T.97
,
A:Q.205
,
A:S.225
,
A:S.225
,
B:T.280
,
B:T.280
Water bridges:
A:E.98
,
A:N.177
Salt bridges:
A:H.227
,
A:K.228
pi-Stacking:
A:H.125
PLP.2:
13 residues within 4Å:
Chain A:
G.279
,
T.280
Chain B:
T.96
,
T.97
,
H.125
,
A.127
,
N.177
,
D.202
,
A.204
,
Q.205
,
S.225
,
H.227
,
K.228
15
PLIP interactions
:
14 interactions with chain B
,
1 interactions with chain A
Hydrophobic interactions:
B:A.204
,
B:K.228
Hydrogen bonds:
B:T.97
,
B:T.97
,
B:T.97
,
B:Q.205
,
B:S.225
,
B:S.225
,
B:K.228
,
A:T.280
Water bridges:
B:E.98
,
B:N.177
Salt bridges:
B:H.227
,
B:K.228
pi-Stacking:
B:H.125
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Lima, C.D., Analysis of the E. coli NifS CsdB Protein at 2.0A Reveals the Structural Basis for Perselenide and Persulfide Intermediate Formation. J.Mol.Biol. (2002)
Release Date
2001-07-04
Peptides
SELENOCYSTEINE LYASE:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A
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