SMTL ID : 1jgj.1

CRYSTAL STRUCTURE OF SENSORY RHODOPSIN II AT 2.4 ANGSTROMS: INSIGHTS INTO COLOR TUNING AND TRANSDUCER INTERACTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 3 residues within 4Å: Chain A: Y.36, I.156, A.212 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.36, A:Y.36, A:I.156, A:A.212

1 x RET: RETINAL(Covalent)

RET.2: 18 residues within 4Å: Chain A: W.76, T.79, T.80, I.83, V.108, M.109, G.112, F.127, G.130, A.131, F.134, W.171, Y.174, P.175, W.178, D.201, T.204, K.205 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:W.76, A:T.80, A:I.83, A:V.108, A:F.127, A:F.127, A:F.134, A:W.171, A:W.171, A:Y.174, A:Y.174, A:Y.174, A:P.175, A:W.178, A:K.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luecke, H. et al., Crystal structure of sensory rhodopsin II at 2.4 angstroms: insights into color tuning and transducer interaction. Science (2001)

Release Date

2001-07-18

Peptides

SENSORY RHODOPSIN II: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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SENSORY RHODOPSIN II