SMTL ID : 1jiz.2 (1 other biounit)

Crystal Structure Analysis of human Macrophage Elastase MMP-12

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.120, H.124, H.130 Ligands: CGS.6 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.120, A:H.124, A:H.130 ZN.2: 5 residues within 4Å: Chain A: H.70, D.72, H.74, H.85, H.98 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.70, A:D.72, A:H.85, A:H.98

3 x CA: CALCIUM ION(Non-covalent)

CA.3: 6 residues within 4Å: Chain A: D.77, G.78, G.80, I.82, D.100, E.103 6 PLIP interactions: 6 interactions with chain A Metal complexes: A:D.77, A:G.78, A:G.80, A:I.82, A:D.100, A:E.103 CA.4: 5 residues within 4Å: Chain A: D.60, G.92, I.93, G.94, D.96 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.60, A:G.92, A:G.94, A:D.96, H2O.6 CA.5: 3 residues within 4Å: Chain A: D.26, E.101, E.103 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.26, A:E.101, A:E.101, A:E.103, H2O.5

1 x CGS: N-HYDROXY-2(R)-[[(4-METHOXYPHENYL)SULFONYL](3-PICOLYL)AMINO]-3-METHYLBUTANAMIDE HYDROCHLORIDE(Non-covalent)

CGS.6: 11 residues within 4Å: Chain A: I.82, L.83, A.84, T.117, H.120, E.121, H.124, H.130, P.140, Y.142 Ligands: ZN.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.82, A:L.83, A:T.117 Hydrogen bonds: A:L.83, A:A.84, A:A.84 Water bridges: A:A.86, A:Y.142

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nar, H. et al., Crystal structure of human macrophage elastase (MMP-12) in complex with a hydroxamic acid inhibitor. J.Mol.Biol. (2001)

Release Date

2002-07-03

Peptides

macrophage elastase MMP-12: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

macrophage elastase MMP-12

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