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SMTL ID : 1jjk.6
(7 other biounits)
Selenomethionine Substitution of Orotidine-5'-monophosphate Decarboxylase from E. coli Causes a Change in Crystal Contacts and Space Group
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.00 Å
Oligo State
homo-dimer
Ligands
2 x
BMP
:
6-HYDROXYURIDINE-5'-PHOSPHATE
(Non-covalent)
BMP.1:
17 residues within 4Å:
Chain A:
A.20
,
D.22
,
K.44
,
D.71
,
K.73
,
L.130
,
T.131
,
P.189
,
R.192
,
Q.201
,
V.219
,
I.220
,
G.221
,
R.222
Chain B:
D.76
,
I.77
,
T.80
14
PLIP interactions
:
12 interactions with chain A
,
2 interactions with chain B
Hydrophobic interactions:
A:L.130
,
A:P.189
Hydrogen bonds:
A:D.22
,
A:K.44
,
A:K.73
,
A:T.131
,
A:T.131
,
A:Q.201
,
A:G.221
,
A:R.222
,
B:T.80
,
B:T.80
Salt bridges:
A:R.192
,
A:R.222
BMP.2:
17 residues within 4Å:
Chain A:
D.76
,
I.77
,
T.80
Chain B:
A.20
,
D.22
,
K.44
,
D.71
,
K.73
,
L.130
,
T.131
,
P.189
,
R.192
,
Q.201
,
V.219
,
I.220
,
G.221
,
R.222
14
PLIP interactions
:
13 interactions with chain B
,
1 interactions with chain A
Hydrophobic interactions:
B:L.130
,
B:P.189
Hydrogen bonds:
B:D.22
,
B:K.44
,
B:K.73
,
B:T.131
,
B:T.131
,
B:T.131
,
B:Q.201
,
B:G.221
,
B:R.222
,
A:T.80
Salt bridges:
B:R.192
,
B:R.222
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Poulsen, J.C. et al., Selenomethionine substitution of orotidine-5'-monophosphate decarboxylase causes a change in crystal contacts and space group. Acta Crystallogr.,Sect.D (2001)
Release Date
2001-08-01
Peptides
OROTIDINE 5'-PHOSPHATE DECARBOXYLASE:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
K
B
L
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OROTIDINE 5'-PHOSPHATE DECARBOXYLASE
Toggle Identical (AB)
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1jjk.5
|
1jjk.7
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1jjk.8
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1l2u.1
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