- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-tetramer
- Ligands
- 9 x PO4: PHOSPHATE ION(Non-functional Binders)
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 4 x URA: URACIL(Non-covalent)
URA.3: 8 residues within 4Å:- Chain A: M.165, Y.226, Y.227, I.228, G.233, D.234, F.235
- Ligands: PRP.4
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:I.228, A:F.235
- pi-Stacking: A:Y.227
URA.8: 9 residues within 4Å:- Chain B: M.165, A.167, Y.226, Y.227, I.228, G.233, D.234, F.235
- Ligands: PO4.5
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:I.228, B:G.233, B:F.235
- pi-Stacking: B:Y.227
URA.12: 8 residues within 4Å:- Chain C: M.165, Y.227, I.228, G.233, D.234, F.235, G.236
- Ligands: PO4.10
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:I.228, C:G.233, C:F.235, C:G.236
URA.15: 8 residues within 4Å:- Chain D: M.165, A.167, Y.227, I.228, G.233, D.234, F.235
- Ligands: PO4.13
4 PLIP interactions:4 interactions with chain D- Hydrophobic interactions: D:A.167
- Hydrogen bonds: D:I.228, D:G.233, D:F.235
- 1 x PRP: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose(Non-covalent)
PRP.4: 17 residues within 4Å:- Chain A: V.110, R.111, A.112, R.136, D.163, M.165, A.167, T.168, A.169, G.170, S.171, D.234, G.236
- Chain B: Y.147, K.149
- Ligands: MG.2, URA.3
12 PLIP interactions:10 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:A.112, A:D.163, A:A.167, A:T.168, A:A.169, A:G.170, A:S.171, A:G.236, B:Y.147
- Salt bridges: A:R.111, A:R.136, B:K.149
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Schumacher, M.A. et al., The structural mechanism of GTP stabilized oligomerization and catalytic activation of the Toxoplasma gondii uracil phosphoribosyltransferase. Proc.Natl.Acad.Sci.USA (2002)
- Release Date
- 2002-01-16
- Peptides
- Uracil phosphoribosyltransferase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
AC
DD
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-tetramer
- Ligands
- 9 x PO4: PHOSPHATE ION(Non-functional Binders)
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 4 x URA: URACIL(Non-covalent)
- 1 x PRP: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Schumacher, M.A. et al., The structural mechanism of GTP stabilized oligomerization and catalytic activation of the Toxoplasma gondii uracil phosphoribosyltransferase. Proc.Natl.Acad.Sci.USA (2002)
- Release Date
- 2002-01-16
- Peptides
- Uracil phosphoribosyltransferase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
AC
DD
C