SMTL ID : 1jm6.1

Pyruvate dehydrogenase kinase, isozyme 2, containing ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: N.255, A.324 Ligands: ADP.2 No protein-ligand interaction detected (PLIP) MG.3: 3 residues within 4Å: Chain B: E.251, N.255 Ligands: ADP.4 No protein-ligand interaction detected (PLIP)

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 18 residues within 4Å: Chain A: N.255, R.258, A.259, D.290, V.295, L.303, Y.308, S.309, T.310, A.324, G.325, F.326, G.327, Y.328, G.329, L.330, T.354 Ligands: MG.1 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:N.255, A:R.258, A:D.290, A:S.309, A:S.309, A:T.310, A:T.310, A:A.324, A:F.326, A:G.327, A:L.330, A:T.354 ADP.4: 19 residues within 4Å: Chain B: N.255, R.258, A.259, D.290, V.295, L.303, Y.308, S.309, T.310, A.324, G.325, F.326, G.327, Y.328, G.329, L.330, P.331, T.354 Ligands: MG.3 16 PLIP interactions: 16 interactions with chain B Hydrogen bonds: B:N.255, B:R.258, B:D.290, B:S.309, B:S.309, B:S.309, B:T.310, B:T.310, B:A.311, B:G.325, B:G.327, B:Y.328, B:L.330 Water bridges: B:A.256, B:D.290, B:G.292

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Steussy, C.N. et al., Structure of pyruvate dehydrogenase kinase. Novel folding pattern for a serine protein kinase. J.Biol.Chem. (2001)

Release Date

2001-10-24

Peptides

Pyruvate dehydrogenase kinase, isozyme 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Pyruvate dehydrogenase kinase, isozyme 2

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