SMTL ID : 1jpj.1

GMPPNP Complex of SRP GTPase NG Domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)

GNP.1: 17 residues within 4Å: Chain A: L.106, Q.107, G.108, S.109, G.110, K.111, T.112, T.113, K.117, Q.144, G.190, K.246, D.248, G.271, V.272, S.273, E.274 24 PLIP interactions: 24 interactions with chain A Hydrogen bonds: A:Q.107, A:G.108, A:S.109, A:G.110, A:K.111, A:K.111, A:K.111, A:K.111, A:T.112, A:T.112, A:T.113, A:T.113, A:K.117, A:Q.144, A:Q.144, A:K.246, A:K.246, A:S.273, A:E.274 Water bridges: A:T.113, A:G.190, A:G.190 Salt bridges: A:D.248, A:E.274

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Padmanabhan, S. et al., The conformation of bound GMPPNP suggests a mechanism for gating the active site of the SRP GTPase. Structure (2001)

Release Date

2002-02-02

Peptides

SIGNAL RECOGNITION PARTICLE PROTEIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SIGNAL RECOGNITION PARTICLE PROTEIN

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