SMTL ID : 1jrq.1

X-ray Structure Analysis of the Role of the Conserved Tyrosine-369 in Active Site of E. coli Amine Oxidase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

2 x CU: COPPER (II) ION(Non-covalent)

CU.1: 3 residues within 4Å: Chain A: H.524, H.526, H.689 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.524, A:H.526, A:H.689, H2O.16 CU.4: 3 residues within 4Å: Chain B: H.524, H.526, H.689 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.524, B:H.526, B:H.689, H2O.38, H2O.45

4 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: K.133, D.533, L.534, D.535, D.678, A.679 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.533, A:L.534, A:D.535, A:D.678, A:A.679, H2O.6 CA.3: 4 residues within 4Å: Chain A: E.573, H.644, Y.667, E.672 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.573, A:E.672, H2O.7, H2O.7, H2O.28 CA.5: 6 residues within 4Å: Chain B: K.133, D.533, L.534, D.535, D.678, A.679 6 PLIP interactions: 5 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.533, B:L.534, B:D.535, B:D.678, B:A.679, H2O.36 CA.6: 3 residues within 4Å: Chain B: E.573, Y.667, E.672 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.573, B:Y.667, B:E.672, H2O.37, H2O.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murray, J.M. et al., Conserved tyrosine-369 in the active site of Escherichia coli copper amine oxidase is not essential. Biochemistry (2001)

Release Date

2001-11-21

Peptides

Copper amine oxidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Copper amine oxidase