SMTL ID : 1jvd.1

CRYSTAL STRUCTURE OF HUMAN AGX2 COMPLEXED WITH UDPGLCNAC

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x UD1: URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE(Non-covalent)

UD1.1: 21 residues within 4Å: Chain A: L.108, A.109, G.110, G.111, M.165, Q.196, P.220, G.222, N.223, C.251, V.252, V.289, G.290, E.303, Y.304, N.327, F.381, F.383, F.403, K.407 Chain B: R.453 19 PLIP interactions: 2 interactions with chain B, 17 interactions with chain A Hydrogen bonds: B:R.453, A:G.110, A:G.110, A:Q.196, A:Q.196, A:G.222, A:N.223, A:V.252, A:G.290, A:E.303, A:E.303, A:N.327, A:K.407 Salt bridges: B:R.453, A:K.407, A:K.407, A:K.407 Hydrophobic interactions: A:F.381, A:F.383 UD1.2: 21 residues within 4Å: Chain A: R.453 Chain B: L.108, A.109, G.110, G.111, M.165, Q.196, P.220, G.222, N.223, C.251, V.252, V.289, G.290, E.303, Y.304, N.327, F.381, F.383, F.403, K.407 21 PLIP interactions: 16 interactions with chain B, 5 interactions with chain A Hydrophobic interactions: B:F.381, B:F.383 Hydrogen bonds: B:G.110, B:G.111, B:Q.196, B:Q.196, B:G.222, B:N.223, B:V.252, B:G.290, B:E.303, B:E.303, B:N.327, B:K.407, A:R.453 Salt bridges: B:K.407, B:K.407, A:R.453, A:R.453 Water bridges: A:S.454, A:S.454

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Peneff, C. et al., Crystal structures of two human pyrophosphorylase isoforms in complexes with UDPGlc(Gal)NAc: role of the alternatively spliced insert in the enzyme oligomeric assembly and active site architecture. EMBO J. (2001)

Release Date

2002-08-29

Peptides

UDPGLCNAC PYROPHOSPHORYLASE (AGX2): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

UDPGLCNAC PYROPHOSPHORYLASE (AGX2)

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