SMTL ID : 1jw9.1

Structure of the Native MoeB-MoaD Protein Complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-oligomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.172, C.175, C.244, C.247 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.172, A:C.175, A:C.244, A:C.247 ZN.5: 4 residues within 4Å: Chain C: C.172, C.175, C.244, C.247 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.172, C:C.175, C:C.244, C:C.247

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 7 residues within 4Å: Chain A: G.40, G.41, L.42, R.73, Q.74, I.197 Chain B: G.81 8 PLIP interactions: 6 interactions with chain A, 1 interactions with chain B, 1 interactions with chain C Hydrogen bonds: A:G.41, A:L.42, B:G.81 Water bridges: A:G.43, A:R.73, A:Q.74, C:R.14 Salt bridges: A:R.73 SO4.3: 4 residues within 4Å: Chain A: R.156 Chain B: Q.9 Chain C: I.17, R.19 4 PLIP interactions: 1 interactions with chain A, 2 interactions with chain C, 1 interactions with chain B Salt bridges: A:R.156, C:R.19 Hydrogen bonds: C:R.19, B:Q.9 SO4.4: 4 residues within 4Å: Chain A: S.69, N.70, R.73 Chain C: R.14 10 PLIP interactions: 9 interactions with chain A, 1 interactions with chain C Hydrogen bonds: A:S.69, A:S.69, A:N.70 Water bridges: A:S.67, A:S.67, A:R.73, A:R.73, A:R.73 Salt bridges: A:R.73, C:R.14 SO4.6: 7 residues within 4Å: Chain C: G.40, G.41, L.42, R.73, Q.74, I.197 Chain D: G.81 8 PLIP interactions: 1 interactions with chain D, 6 interactions with chain C, 1 interactions with chain A Hydrogen bonds: D:G.81, C:G.41, C:L.42 Water bridges: C:G.43, C:R.73, C:Q.74, A:R.14 Salt bridges: C:R.73 SO4.7: 4 residues within 4Å: Chain A: I.17, R.19 Chain C: R.156 Chain D: Q.9 4 PLIP interactions: 1 interactions with chain C, 1 interactions with chain D, 2 interactions with chain A Salt bridges: C:R.156, A:R.19 Hydrogen bonds: D:Q.9, A:R.19 SO4.8: 4 residues within 4Å: Chain A: R.14 Chain C: S.69, N.70, R.73 10 PLIP interactions: 9 interactions with chain C, 1 interactions with chain A Hydrogen bonds: C:S.69, C:S.69, C:N.70 Water bridges: C:S.67, C:S.67, C:R.73, C:R.73, C:R.73 Salt bridges: C:R.73, A:R.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lake, M.W. et al., Mechanism of ubiquitin activation revealed by the structure of a bacterial MoeB-MoaD complex. Nature (2001)

Release Date

2001-11-21

Peptides

MOLYBDOPTERIN BIOSYNTHESIS MOEB PROTEIN: AC
MOLYBDOPTERIN [MPT] CONVERTING FACTOR, SUBUNIT 1: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

C
B

B
D

D
D

MOLYBDOPTERIN BIOSYNTHESIS MOEB PROTEIN

MOLYBDOPTERIN [MPT] CONVERTING FACTOR, SUBUNIT 1

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