SMTL ID : 1jxm.1

CRYSTAL STRUCTURE OF THE GMP BOUND SH3-HOOK-GK FRAGMENT OF PSD-95

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x 5GP: GUANOSINE-5'-MONOPHOSPHATE(Non-covalent)

5GP.1: 8 residues within 4Å: Chain A: R.145, R.148, Y.157, Y.181, Y.186, D.206 Ligands: GAI.2, MPD.4 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Y.157, A:D.206, A:D.206 Water bridges: A:R.145, A:R.148 Salt bridges: A:R.145, A:R.148, A:D.206

2 x GAI: GUANIDINE(Non-functional Binders)(Non-covalent)

GAI.2: 1 residues within 4Å: Ligands: 5GP.1 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.148, A:R.148, A:R.148 GAI.3: 2 residues within 4Å: Chain A: Y.150, D.156 4 PLIP interactions: 4 interactions with chain A Water bridges: A:Y.150, A:Y.150, A:Y.150 Salt bridges: A:D.156

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.4: 9 residues within 4Å: Chain A: E.177, A.178, G.179, Y.186, G.187, T.188, D.206, V.207 Ligands: 5GP.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.186 Hydrogen bonds: A:E.177, A:E.177, A:T.188 MPD.5: 6 residues within 4Å: Chain A: S.138, C.139, V.140, P.141, R.155, D.156 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.140, A:P.141 Hydrogen bonds: A:R.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tavares, G.A. et al., Structural characterization of the intramolecular interaction between the SH3 and guanylate kinase domains of PSD-95. Mol.Cell (2001)

Release Date

2002-01-16

Peptides

POSTSYNAPTIC DENSITY PROTEIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

POSTSYNAPTIC DENSITY PROTEIN

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