SMTL ID : 1k1y.1 (2 other biounits)

Crystal structure of thermococcus litoralis 4-alpha-glucanotransferase complexed with acarbose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x GLC- GLC- AC1: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC-AC1.1: 16 residues within 4Å: Chain A: H.11, H.13, E.123, R.124, R.182, Y.183, F.187, D.213, D.214, K.217, W.221, Y.272, E.274, W.278, D.354, W.357 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:W.278, A:W.357 Hydrogen bonds: A:H.13, A:R.124, A:R.124, A:R.182, A:D.213, A:D.214, A:D.354, A:R.182, A:K.217, A:K.217, A:E.274 Water bridges: A:H.11, A:H.13, A:W.120, A:E.123, A:E.216, A:Y.272, A:W.357

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: D.392, D.394, D.396, R.398, E.400 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.392, A:D.396, A:R.398, A:E.400, A:E.400

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Imamura, H. et al., Crystal structures of 4-alpha-glucanotransferase from Thermococcus litoralis and its complex with an inhibitor. J.BIOL.CHEM. (2003)

Release Date

2003-06-17

Peptides

4-ALPHA-GLUCANOTRANSFERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

4-ALPHA-GLUCANOTRANSFERASE

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