SMTL ID : 1k2o.1 (1 other biounit)

Cytochrome P450Cam with Bound BIS(2,2'-BIPYRIDINE)-(5-METHYL-2-2'-BIPYRIDINE)-C2-ADAMANTANE RUTHENIUM (II)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

2 x CAC: CACODYLATE ION(Non-covalent)

CAC.1: 7 residues within 4Å: Chain A: C.85, F.87, R.90, G.93, E.94, Y.96, S.102 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.102 CAC.2: 4 residues within 4Å: Chain A: N.10, L.11, D.27, C.58 No protein-ligand interaction detected (PLIP)

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.3: 26 residues within 4Å: Chain A: P.100, T.101, Q.108, R.112, V.119, L.244, L.245, G.248, G.249, T.252, L.294, V.295, D.297, R.299, Q.322, T.349, F.350, G.351, H.355, C.357, L.358, G.359, L.362, A.363 Ligands: RFA.4, RFB.5 23 PLIP interactions: 22 interactions with chain A, 1 Ligand-Water interactions Hydrophobic interactions: A:V.119, A:L.244, A:L.244, A:T.252, A:L.294, A:V.295, A:V.295, A:Q.322, A:T.349, A:F.350, A:F.350, A:L.362 Hydrogen bonds: A:D.297, A:Q.322 Water bridges: A:S.83, A:T.101 Salt bridges: A:R.112, A:R.299, A:H.355, A:H.355 pi-Stacking: A:F.350 Metal complexes: A:C.357, H2O.8

1 x RFA: DELTA-BIS(2,2'-BIPYRIDINE)-(5-METHYL-2-2'-BIPYRIDINE)-C2-ADAMANTANE RUTHENIUM (II)(Non-covalent)

RFA.4: 17 residues within 4Å: Chain A: F.87, P.89, A.92, G.93, E.94, Y.96, M.184, T.185, P.187, F.193, L.244, V.247, D.297, I.395, V.396 Ligands: HEM.3, RFB.5 8 PLIP interactions: 8 interactions with chain A, Hydrophobic interactions: A:F.87, A:P.89, A:P.187, A:F.193, A:L.244, A:I.395 pi-Stacking: A:F.87 Halogen bonds: A:T.185

1 x RFB: LAMBDA-BIS(2,2'-BIPYRIDINE)-(5-METHYL-2-2'-BIPYRIDINE)-C2-ADAMANTANE RUTHENIUM (II)(Non-covalent)

RFB.5: 18 residues within 4Å: Chain A: Y.29, F.87, P.89, A.92, G.93, E.94, Y.96, M.184, T.185, P.187, F.193, L.244, V.247, D.297, I.395, V.396 Ligands: HEM.3, RFA.4 11 PLIP interactions: 11 interactions with chain A, Hydrophobic interactions: A:Y.29, A:F.87, A:P.89, A:A.92, A:F.193, A:F.193, A:L.244, A:I.395 pi-Stacking: A:Y.29, A:F.87 Halogen bonds: A:T.185

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dunn, A.R. et al., Probing the open state of cytochrome P450cam with ruthenium-linker substrates. Proc.Natl.Acad.Sci.USA (2001)

Release Date

2001-10-17

Peptides

Cytochrome P450CAM: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P450CAM

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