SMTL ID : 1k77.1

Crystal Structure of EC1530, a Putative Oxygenase from Escherichia coli

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 7 residues within 4Å: Chain A: E.143, Q.176, D.178, Q.204, R.211, E.240 Ligands: FMT.5 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.143, A:D.178, A:E.240, H2O.165 MG.2: 2 residues within 4Å: Chain A: V.185, D.186 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:V.185

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: P.2, R.3, F.4, F.29, D.30 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:P.2, A:F.4, A:D.30, A:D.30 GOL.4: 6 residues within 4Å: Chain A: S.9, F.17, R.20, L.35, F.36, Y.40 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.9, A:R.20, A:L.35, A:F.36, A:Y.40 Water bridges: A:F.17, A:R.20

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.5: 8 residues within 4Å: Chain A: E.143, L.145, V.149, D.178, H.181, R.211, E.240 Ligands: MG.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.211, A:R.211 Water bridges: A:E.240

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y. et al., Crystal structure of Escherichia coli EC1530, a glyoxylate induced protein YgbM. Proteins (2002)

Release Date

2002-03-13

Peptides

Hypothetical protein ygbM: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Hypothetical protein ygbM