SMTL ID : 1k9q.1

YAP65 WW domain complexed to N-(n-octyl)-GPPPY-NH2

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x GLY- PRO- PRO- PRO- TYR- NH2: WW domain binding protein-1(Non-covalent)

GLY-PRO-PRO-PRO-TYR-NH2.1: 11 residues within 4Å: Chain A: E.14, T.18, Y.24, L.26, N.27, H.28, Q.31, T.32, T.33, W.35 Ligands: OCT.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.24, A:Y.24, A:L.26 Hydrogen bonds: A:Y.24, A:H.28, A:T.33

1 x OCT: N-OCTANE(Non-functional Binders)

OCT.2: 2 residues within 4Å: Ligands: GLY-PRO-PRO-PRO-TYR-NH2.1, GLY-PRO-PRO-PRO-TYR-NH2.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pires, J.R. et al., Solution structures of the YAP65 WW domain and the variant L30 K in complex with the peptides GTPPPPYTVG, N-(n-octyl)-GPPPY and PLPPY and the application of peptide libraries reveal a minimal binding epitope. J.Mol.Biol. (2001)

Release Date

2001-12-28

Peptides

65 kDa Yes-associated protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

65 kDa Yes-associated protein

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