SMTL ID : 1kbv.2 (1 other biounit)

NITRITE-SOAKED CRYSTAL STRUCTURE OF THE SOLUBLE DOMAIN OF ANIA FROM NEISSERIA GONORRHOEAE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-trimer

Ligands

6 x CU: COPPER (II) ION(Non-covalent)

CU.1: 4 residues within 4Å: Chain A: H.94, C.135, H.143, M.148 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.94, A:C.135, A:H.143 CU.2: 6 residues within 4Å: Chain A: D.97, H.99, H.134 Chain B: H.240, H.289 Ligands: NO2.4 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Metal complexes: A:H.99, A:H.134, B:H.289 CU.5: 4 residues within 4Å: Chain B: H.94, C.135, H.143, M.148 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.94, B:C.135, B:H.143 CU.6: 6 residues within 4Å: Chain B: D.97, H.99, H.134 Chain C: H.240, H.289 Ligands: NO2.7 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain C Metal complexes: B:H.99, B:H.134, C:H.289 CU.8: 5 residues within 4Å: Chain C: P.93, H.94, C.135, H.143, M.148 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:H.94, C:C.135, C:H.143 CU.9: 5 residues within 4Å: Chain A: H.289 Chain C: D.97, H.99, H.134 Ligands: NO2.3 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain A Metal complexes: C:H.99, C:H.134, A:H.289

3 x NO2: NITRITE ION(Non-covalent)

NO2.3: 7 residues within 4Å: Chain A: H.240, I.242, H.289 Chain C: D.97, H.99, H.134 Ligands: CU.9 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.240 NO2.4: 7 residues within 4Å: Chain A: D.97, H.99, H.134 Chain B: H.240, I.242, H.289 Ligands: CU.2 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:H.240, A:D.97 Water bridges: A:D.97 NO2.7: 7 residues within 4Å: Chain B: D.97, H.99, H.134 Chain C: H.240, I.242, H.289 Ligands: CU.6 2 PLIP interactions: 1 interactions with chain C, 1 interactions with chain B Hydrogen bonds: C:H.240 Water bridges: B:D.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boulanger, M.J. et al., Crystal structure of the soluble domain of the major anaerobically induced outer membrane protein (AniA) from pathogenic Neisseria: a new class of copper-containing nitrite reductases. J.Mol.Biol. (2002)

Release Date

2001-12-05

Peptides

Major outer membrane protein PAN 1: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

Major outer membrane protein PAN 1

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