SMTL ID : 1kgj.1

Rat transthyretin (also called prealbumin) complex with 3',5'-dibromoflavone (EMD21388)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

2 x FL8: 6,4'-DIHYDROXY-3-METHYL-3',5'-DIBROMOFLAVONE(Non-covalent)

FL8.1: 12 residues within 4Å: Chain B: K.15, L.17, T.106, A.108, L.110, S.117, T.119 Chain D: L.17, A.108, L.110, S.117, T.119 10 PLIP interactions: 7 interactions with chain B, 3 interactions with chain D Hydrophobic interactions: B:K.15, B:L.17, B:T.106, D:L.17 Hydrogen bonds: B:K.15, B:S.117, B:S.117, D:S.117 Halogen bonds: B:S.117, D:S.117 FL8.2: 13 residues within 4Å: Chain A: K.15, L.17, T.106, A.108, A.109, L.110, S.117, T.119 Chain C: K.15, L.17, A.108, A.109, L.110 9 PLIP interactions: 5 interactions with chain A, 4 interactions with chain C Hydrophobic interactions: A:L.17, A:T.106, A:A.108, C:K.15 Hydrogen bonds: A:K.15, C:S.117 Halogen bonds: A:S.117 Water bridges: C:K.15 pi-Cation interactions: C:K.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Muziol, T. et al., Comparison of binding interactions of dibromoflavonoids with transthyretin. Acta Biochim.Pol. (2001)

Release Date

2002-11-27

Peptides

TRANSTHYRETIN: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

TRANSTHYRETIN

Related Entries With Identical Sequence