SMTL ID : 1kgz.1

Crystal Structure Analysis of the Anthranilate Phosphoribosyltransferase from Erwinia carotovora (current name, Pectobacterium carotovorum)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x HG: MERCURY (II) ION(Non-covalent)

HG.1: 2 residues within 4Å: Chain A: C.113, L.310 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:C.113, A:C.113 HG.5: 4 residues within 4Å: Chain B: C.113, G.114, A.115, L.310 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:C.113, B:C.113

4 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 4 residues within 4Å: Chain A: S.103, E.237 Ligands: MN.3, PRP.4 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.103, A:E.237, H2O.3, H2O.4 MN.3: 4 residues within 4Å: Chain A: D.95, D.236, E.237 Ligands: MN.2 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.236, H2O.2, H2O.4, H2O.4 MN.6: 4 residues within 4Å: Chain B: S.103, E.237 Ligands: MN.7, PRP.8 4 PLIP interactions: 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:S.103, B:E.237, H2O.8, H2O.8 MN.7: 4 residues within 4Å: Chain B: D.95, D.236, E.237 Ligands: MN.6 5 PLIP interactions: 1 interactions with chain B, 4 Ligand-Water interactions Metal complexes: B:D.236, H2O.5, H2O.5, H2O.8, H2O.8

2 x PRP: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose(Non-covalent)

PRP.4: 13 residues within 4Å: Chain A: V.90, G.91, G.93, G.94, N.101, I.102, S.103, T.104, K.119, N.122, S.124, S.132 Ligands: MN.2 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:G.91, A:G.91, A:G.94, A:N.101, A:I.102, A:S.103, A:T.104, A:N.122, A:S.124, A:S.132, A:S.132 Water bridges: A:G.93, A:G.93 Salt bridges: A:K.119, A:K.119 PRP.8: 15 residues within 4Å: Chain B: V.90, G.91, G.93, G.94, N.101, I.102, S.103, T.104, K.119, S.124, A.130, G.131, S.132, E.237 Ligands: MN.6 19 PLIP interactions: 19 interactions with chain B Hydrogen bonds: B:G.91, B:G.94, B:N.101, B:S.103, B:T.104, B:T.104, B:S.124, B:S.132, B:S.132, B:S.132 Water bridges: B:I.102, B:I.102, B:K.119, B:N.122, B:S.132, B:C.133, B:C.133 Salt bridges: B:K.119, B:K.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, C. et al., The Crystal Structure of Anthranilate Phosphoribosyltransferase from the Enterobacterium Pectobacterium carotovorum. FEBS Lett. (2002)

Release Date

2002-10-23

Peptides

Anthranilate phosphoribosyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Anthranilate phosphoribosyltransferase

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