SMTL ID : 1khh.1

Crystal Structure of Guanidinoacetate Methyltransferase from Rat Liver: A Template Structure of Protein Arginine Methyltransferase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 23 residues within 4Å: Chain A: M.12, G.30, F.31, G.32, M.33, A.34, I.35, A.36, I.51, E.52, C.53, N.54, V.57, G.77, L.78, W.79, E.80, D.97, T.98, Y.99 Chain B: A.180, D.181, R.183 17 PLIP interactions: 15 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:F.31, A:F.31, A:G.32, A:M.33, A:A.34, A:I.35, A:A.36, A:C.53, A:W.79, A:E.80, A:D.97, A:Y.99, A:Y.99 Water bridges: A:Y.99, B:A.180, B:R.183 pi-Stacking: A:Y.99 SAH.2: 21 residues within 4Å: Chain A: A.180, D.181 Chain B: M.12, G.30, F.31, G.32, M.33, A.34, I.35, A.36, E.52, C.53, N.54, V.57, G.77, L.78, W.79, E.80, D.97, T.98, Y.99 13 PLIP interactions: 13 interactions with chain B Hydrogen bonds: B:F.31, B:F.31, B:G.32, B:M.33, B:I.35, B:A.36, B:C.53, B:W.79, B:E.80, B:D.97, B:Y.99, B:Y.99 pi-Stacking: B:Y.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Komoto, J. et al., Crystal structure of guanidinoacetate methyltransferase from rat liver: a model structure of protein arginine methyltransferase. J.Mol.Biol. (2002)

Release Date

2001-12-12

Peptides

Guanidinoacetate methyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Guanidinoacetate methyltransferase