SMTL ID : 1kno.1 (2 other biounits)

CRYSTAL STRUCTURE OF THE COMPLEX OF A CATALYTIC ANTIBODY FAB WITH A TRANSITION STATE ANALOG: STRUCTURAL SIMILARITIES IN ESTERASE-LIKE ABZYMES

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: R.61, E.79 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.79

1 x PNP: METHYL-PHOSPHONIC ACID MONO-(4-NITRO-PHENYL) ESTER(Non-covalent)

PNP.2: 11 residues within 4Å: Chain A: L.89, Y.91, Y.96 Chain B: H.35, V.37, W.47, G.99, D.100, Y.101, Y.102, W.109 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:D.100, B:Y.101 pi-Stacking: B:H.35, B:Y.101, A:Y.96 Hydrophobic interactions: A:L.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Charbonnier, J.B. et al., Crystal structure of the complex of a catalytic antibody Fab fragment with a transition state analog: structural similarities in esterase-like catalytic antibodies. Proc.Natl.Acad.Sci.USA (1995)

Release Date

1996-01-29

Peptides

IGG2A FAB FRAGMENT CNJ206: A
IGG2A FAB FRAGMENT CNJ206: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

IGG2A FAB FRAGMENT CNJ206

IGG2A FAB FRAGMENT CNJ206

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