- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 2 x LYS- DLY: LYSINE(Non-covalent)
LYS-DLY.2: 13 residues within 4Å:- Chain A: K.54, T.157, H.191, R.271, R.307, Y.311, Y.378, M.382
- Chain B: C.342, E.343, S.344, Y.386
- Ligands: PLP.1
11 PLIP interactions:9 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:Y.378
- Hydrogen bonds: A:K.54, A:H.191, A:H.191, A:Y.311, A:Y.311, B:E.343, B:S.344
- Salt bridges: A:H.191, A:R.271, A:R.307
LYS-DLY.4: 13 residues within 4Å:- Chain A: C.342, E.343, S.344, Y.386
- Chain B: K.54, T.157, H.191, R.271, R.307, Y.311, Y.378, M.382
- Ligands: PLP.3
10 PLIP interactions:2 interactions with chain A, 8 interactions with chain B- Hydrogen bonds: A:E.343, A:S.344, B:K.54, B:H.191, B:H.191, B:Y.311
- Hydrophobic interactions: B:Y.378
- Salt bridges: B:H.191, B:R.271, B:R.307
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Levdikov, V. et al., Diaminopimelate Decarboxylase uses a Versatile Active Site for Stereospecific Decarboxylation. To be Published
- Release Date
- 2003-11-11
- Peptides
- Diaminopimelate decarboxylase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 2 x LYS- DLY: LYSINE(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Levdikov, V. et al., Diaminopimelate Decarboxylase uses a Versatile Active Site for Stereospecific Decarboxylation. To be Published
- Release Date
- 2003-11-11
- Peptides
- Diaminopimelate decarboxylase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A