- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- 4 x ARG: ARGININE(Non-covalent)
ARG.2: 17 residues within 4Å:- Chain A: Y.84, T.88, S.89, R.92, N.120, D.121, R.124, S.173, M.174, D.175, S.182, E.184, E.258, Y.270, Y.310
- Ligands: ANP.1, SIN.3
12 PLIP interactions:12 interactions with chain A,- Hydrophobic interactions: A:T.88
- Hydrogen bonds: A:Y.84, A:Y.84, A:S.89, A:R.92, A:N.120, A:S.173, A:E.258
- Water bridges: A:Y.270
- Salt bridges: A:D.121, A:R.124, A:D.175
ARG.5: 16 residues within 4Å:- Chain B: Y.84, T.88, S.89, R.92, N.120, D.121, R.124, S.173, D.175, S.182, E.184, E.258, Y.270, Y.310
- Ligands: ANP.4, SIN.6
13 PLIP interactions:13 interactions with chain B,- Hydrophobic interactions: B:T.88
- Hydrogen bonds: B:Y.84, B:Y.84, B:S.89, B:R.92, B:N.120, B:S.173, B:E.258, B:Y.270
- Water bridges: B:R.92
- Salt bridges: B:D.121, B:R.124, B:D.175
ARG.8: 15 residues within 4Å:- Chain C: Y.84, T.88, S.89, R.92, N.120, D.121, R.124, S.173, S.182, E.184, E.258, Y.270, Y.310
- Ligands: ANP.7, SIN.9
12 PLIP interactions:12 interactions with chain C,- Hydrogen bonds: C:Y.84, C:S.89, C:R.92, C:N.120, C:S.173, C:S.173, C:E.258, C:Y.310
- Water bridges: C:Y.270
- Salt bridges: C:D.121, C:R.124, C:D.175
ARG.11: 15 residues within 4Å:- Chain D: Y.84, T.88, S.89, R.92, N.120, D.121, R.124, S.173, S.182, E.184, E.258, Y.270, Y.310
- Ligands: ANP.10, SIN.12
12 PLIP interactions:12 interactions with chain D,- Hydrogen bonds: D:Y.84, D:S.89, D:R.92, D:N.120, D:S.173, D:E.258, D:Y.270, D:Y.310
- Water bridges: D:D.175
- Salt bridges: D:D.121, D:R.124, D:D.175
- 4 x SIN: SUCCINIC ACID(Non-covalent)
SIN.3: 7 residues within 4Å:- Chain A: A.115, T.116, G.119, N.120, D.121, E.184
- Ligands: ARG.2
11 PLIP interactions:9 interactions with chain A, 2 Ligand-Ligand interactions- Hydrogen bonds: A:T.116, A:N.120, A:N.120, A:D.121, A:D.121
- Water bridges: A:T.116, A:G.119, A:G.119
- Salt bridges: A:R.260, R.2
- Hydrophobic interactions: R.2
SIN.6: 7 residues within 4Å:- Chain B: A.115, T.116, G.119, N.120, D.121, E.184
- Ligands: ARG.5
9 PLIP interactions:7 interactions with chain B, 2 Ligand-Ligand interactions- Hydrogen bonds: B:T.116, B:N.120, B:N.120, B:D.121
- Water bridges: B:G.119, B:G.119
- Salt bridges: B:R.260, R.5
- Hydrophobic interactions: R.5
SIN.9: 7 residues within 4Å:- Chain C: A.115, T.116, G.119, N.120, D.121, E.184
- Ligands: ARG.8
12 PLIP interactions:3 Ligand-Ligand interactions, 9 interactions with chain C- Hydrophobic interactions: R.8
- Salt bridges: R.8, R.8, C:R.260
- Hydrogen bonds: C:T.116, C:G.119, C:N.120, C:N.120, C:D.121
- Water bridges: C:T.116, C:T.116, C:Q.122
SIN.12: 8 residues within 4Å:- Chain D: A.115, T.116, G.119, N.120, D.121, E.184
- Ligands: ANP.10, ARG.11
12 PLIP interactions:9 interactions with chain D, 3 Ligand-Ligand interactions- Hydrogen bonds: D:T.116, D:N.120, D:N.120, D:D.121, D:D.121
- Water bridges: D:T.116, D:G.119, D:Q.122
- Salt bridges: D:R.260, R.11, R.11
- Hydrophobic interactions: R.11
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Goto, M. et al., Crystal structure of argininosuccinate synthetase from Thermus thermophilus HB8. Structural basis for the catalytic action. J.Biol.Chem. (2002)
- Release Date
- 2002-04-03
- Peptides
- Argininosuccinate Synthetase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- 4 x ARG: ARGININE(Non-covalent)
- 4 x SIN: SUCCINIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Goto, M. et al., Crystal structure of argininosuccinate synthetase from Thermus thermophilus HB8. Structural basis for the catalytic action. J.Biol.Chem. (2002)
- Release Date
- 2002-04-03
- Peptides
- Argininosuccinate Synthetase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D