SMTL ID : 1kq6.1

p47phox PX domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.18 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: H.51, K.55, R.70, H.74, L.75 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:L.75, A:L.75 Salt bridges: A:H.51, A:K.55, A:R.70, A:H.74 SO4.2: 2 residues within 4Å: Chain A: H.113, D.116 3 PLIP interactions: 3 interactions with chain A Water bridges: A:H.113, A:H.113 Salt bridges: A:H.113 SO4.3: 3 residues within 4Å: Chain A: R.43, F.44, T.45 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.45, A:T.45, A:R.90 Water bridges: A:F.44 Salt bridges: A:R.43

10 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 6 residues within 4Å: Chain A: F.5, I.6, R.7, M.102, S.109, R.110 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.7, A:R.7, A:S.109, A:S.109, A:R.110 GOL.5: 5 residues within 4Å: Chain A: T.4, P.112, L.115, D.116, K.119 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:P.112, A:K.119 GOL.6: 3 residues within 4Å: Chain A: G.2, F.5, R.110 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.2, A:R.110, A:R.110 Water bridges: A:G.2, A:G.2 GOL.7: 6 residues within 4Å: Chain A: W.32, Q.33, D.34, K.38, K.119 Ligands: GOL.9 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.33, A:D.34, A:K.38 Water bridges: A:K.38 GOL.8: 4 residues within 4Å: Chain A: I.71, P.73, H.74, T.100 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.71, A:H.74 Water bridges: A:H.74 GOL.9: 2 residues within 4Å: Chain A: K.119 Ligands: GOL.7 No protein-ligand interaction detected (PLIP) GOL.10: 3 residues within 4Å: Chain A: K.134, K.135, P.136 1 PLIP interactions: 1 interactions with chain A Water bridges: A:T.133 GOL.11: 2 residues within 4Å: Chain A: E.37 Ligands: GOL.12 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.37 Water bridges: A:E.37 GOL.12: 4 residues within 4Å: Chain A: S.36, E.37, K.38 Ligands: GOL.11 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.37 Water bridges: A:E.37, A:E.37, A:K.38, A:K.38 GOL.13: 2 residues within 4Å: Chain A: V.19, P.20 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:P.20

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wahl, M. et al., p47phox PX domain. To be Published

Release Date

2003-11-11

Peptides

neutrophil cytosol factor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

neutrophil cytosol factor 1