SMTL ID : 1ktr.1

Crystal Structure of the Anti-His Tag Antibody 3D5 Single-Chain Fragment (scFv) in Complex with a Oligohistidine peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x HIS- HIS- HIS- HIS: Oligohistidine peptide Antigen(Non-covalent)

HIS-HIS-HIS-HIS.1: 16 residues within 4Å: Chain A: H.34, N.36, Y.40, E.42, Y.44, F.97, G.99, S.100, F.104, Y.169, N.171, D.186, S.195, E.233, S.236, G.237 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.40, A:F.104 Hydrogen bonds: A:N.36, A:G.99 Water bridges: A:N.38, A:V.102, A:E.233, A:S.236, A:S.236, A:S.236, A:S.236 pi-Stacking: A:F.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kaufmann, M. et al., Crystal structure of the anti-His tag antibody 3D5 single-chain fragment complexed to its antigen. J.Mol.Biol. (2002)

Release Date

2002-05-15

Peptides

Anti-his tag antibody 3d5 variable light chain, Peptide linker, Anti-his tag antibody 3d5 variable heavy chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

Anti-his tag antibody 3d5 variable light chain, Peptide linker, Anti-his tag antibody 3d5 variable heavy chain