SMTL ID : 1l3p.1

CRYSTAL STRUCTURE OF THE FUNCTIONAL DOMAIN OF THE MAJOR GRASS POLLEN ALLERGEN Phl p 5b

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

homo-dimer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: A.24, E.84 Chain B: A.28, K.31, Q.77 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Salt bridges: B:K.31 Hydrogen bonds: A:E.84 PO4.3: 5 residues within 4Å: Chain A: A.28, K.31, Q.77 Chain B: A.24, E.84 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Salt bridges: A:K.31 Hydrogen bonds: B:E.84

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: T.21 Chain B: A.28 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:T.21, H2O.1, H2O.5 MG.4: 2 residues within 4Å: Chain A: A.28 Chain B: T.21 3 PLIP interactions: 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:T.21, H2O.1, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rajashankar, K. et al., Structure of the functional domain of the major grass-pollen allergen Phlp 5b. Acta Crystallogr.,Sect.D (2002)

Release Date

2003-02-28

Peptides

POLLEN ALLERGEN Phl p 5b: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

POLLEN ALLERGEN Phl p 5b