SMTL ID : 1l4z.2 (1 other biounit)

X-RAY CRYSTAL STRUCTURE OF THE COMPLEX OF MICROPLASMINOGEN WITH ALPHA DOMAIN OF STREPTOKINASE IN THE PRESENCE CADMIUM IONS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-2-2-mer

Ligands

12 x CD: CADMIUM ION(Non-covalent)

CD.1: 1 residues within 4Å: Chain A: H.26 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.26, H2O.2 CD.2: 3 residues within 4Å: Chain A: H.28, E.84, H.86 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.28, A:E.84, A:E.84, H2O.1, H2O.2 CD.3: 4 residues within 4Å: Chain A: H.60, E.63 Chain C: D.103 Ligands: CD.4 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.63, H2O.1, H2O.1 CD.4: 4 residues within 4Å: Chain A: H.60, E.63 Chain C: E.181 Ligands: CD.3 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.60, A:E.63 CD.5: 2 residues within 4Å: Chain B: D.33, H.129 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.33, B:H.129, H2O.2, H2O.2, H2O.2 CD.6: 1 residues within 4Å: Chain B: S.22 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:S.22 CD.7: 1 residues within 4Å: Chain C: H.26 2 PLIP interactions: 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.26, H2O.5 CD.8: 3 residues within 4Å: Chain C: H.28, E.84, H.86 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:H.28, C:E.84, C:E.84, H2O.4, H2O.4 CD.9: 4 residues within 4Å: Chain A: D.103 Chain C: H.60, E.63 Ligands: CD.10 3 PLIP interactions: 1 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.63, H2O.3, H2O.3 CD.10: 4 residues within 4Å: Chain A: E.181 Chain C: H.60, E.63 Ligands: CD.9 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:H.60, C:E.63 CD.11: 2 residues within 4Å: Chain D: D.33, H.129 5 PLIP interactions: 2 interactions with chain D, 3 Ligand-Water interactions Metal complexes: D:D.33, D:H.129, H2O.5, H2O.5, H2O.5 CD.12: 1 residues within 4Å: Chain D: S.22 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:S.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wakeham, N. et al., Effects of deletion of streptokinase residues 48-59 on plasminogen activation. PROTEIN ENG. (2002)

Release Date

2002-12-11

Peptides

Plasminogen: AC
Streptokinase: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

Plasminogen

Streptokinase

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