- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 4 residues within 4Å:- Chain A: S.35, T.37, P.58, G.59
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:S.35, A:P.58
- Water bridges: A:A.36, A:A.36, A:M.60
SO4.3: 3 residues within 4Å:- Chain A: D.12, H.84
- Ligands: BEF.4
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:D.12
- Water bridges: A:D.11, A:D.12, A:H.84
- Salt bridges: A:H.84, A:K.104
SO4.15: 3 residues within 4Å:- Chain B: R.13, R.16, A.34
3 PLIP interactions:3 interactions with chain B- Water bridges: B:R.16, B:R.16
- Salt bridges: B:R.16
SO4.16: 3 residues within 4Å:- Chain B: M.60, A.64, K.68
1 PLIP interactions:1 interactions with chain B- Salt bridges: B:K.68
- 3 x BEF: BERYLLIUM TRIFLUORIDE ION(Covalent)(Non-covalent)
BEF.4: 9 residues within 4Å:- Chain A: D.54, I.55, R.56, T.82, G.83, H.84, K.104
- Ligands: MG.1, SO4.3
No protein-ligand interaction detected (PLIP)BEF.17: 8 residues within 4Å:- Chain B: D.54, I.55, R.56, T.82, G.83, H.84, K.104
- Ligands: MG.14
No protein-ligand interaction detected (PLIP)BEF.20: 3 residues within 4Å:- Chain B: A.135, E.136, S.139
No protein-ligand interaction detected (PLIP)- 10 x BF2: BERYLLIUM DIFLUORIDE(Non-covalent)
BF2.5: 1 residues within 4Å:- Chain A: E.140
No protein-ligand interaction detected (PLIP)BF2.6: 2 residues within 4Å:- Chain A: K.120, R.123
No protein-ligand interaction detected (PLIP)BF2.7: 2 residues within 4Å:- Chain A: I.94, Q.95
No protein-ligand interaction detected (PLIP)BF2.8: 5 residues within 4Å:- Chain A: F.101, I.102, A.103, R.110
- Chain B: P.88
No protein-ligand interaction detected (PLIP)BF2.9: 2 residues within 4Å:- Chain A: Y.99, K.121
No protein-ligand interaction detected (PLIP)BF2.10: 3 residues within 4Å:- Chain A: S.5, T.29, S.31
No protein-ligand interaction detected (PLIP)BF2.11: 3 residues within 4Å:- Chain A: R.132, A.138, S.139
No protein-ligand interaction detected (PLIP)BF2.12: 4 residues within 4Å:- Chain A: D.86, I.87, P.88
- Ligands: BF2.19
No protein-ligand interaction detected (PLIP)BF2.18: 3 residues within 4Å:- Chain B: R.116, R.117, K.120
No protein-ligand interaction detected (PLIP)BF2.19: 3 residues within 4Å:- Chain B: D.86, I.87
- Ligands: BF2.12
No protein-ligand interaction detected (PLIP)- 1 x BF4: BERYLLIUM TETRAFLUORIDE ION(Non-covalent)
- 1 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Park, S. et al., Two-component signaling in the AAA + ATPase DctD: binding Mg2+ and BeF3- selects between alternate dimeric states of the receiver domain. FASEB J. (2002)
- Release Date
- 2002-10-23
- Peptides
- C4-DICARBOXYLATE TRANSPORT TRANSCRIPTIONAL REGULATORY PROTEIN DCTD: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 3 x BEF: BERYLLIUM TRIFLUORIDE ION(Covalent)(Non-covalent)
- 10 x BF2: BERYLLIUM DIFLUORIDE(Non-covalent)
- 1 x BF4: BERYLLIUM TETRAFLUORIDE ION(Non-covalent)
- 1 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Park, S. et al., Two-component signaling in the AAA + ATPase DctD: binding Mg2+ and BeF3- selects between alternate dimeric states of the receiver domain. FASEB J. (2002)
- Release Date
- 2002-10-23
- Peptides
- C4-DICARBOXYLATE TRANSPORT TRANSCRIPTIONAL REGULATORY PROTEIN DCTD: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B