SMTL ID : 1l6j.1

Crystal structure of human matrix metalloproteinase MMP9 (gelatinase B).

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.80, V.82, H.382, H.386, H.392 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.80, A:H.382, A:H.386, A:H.392 ZN.2: 4 residues within 4Å: Chain A: H.156, D.158, H.171, H.184 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.156, A:D.158, A:H.171, A:H.184

3 x CA: CALCIUM ION(Non-covalent)

CA.3: 8 residues within 4Å: Chain A: D.163, G.164, K.165, D.166, G.167, L.168, D.186, E.189 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.163, A:G.164, A:L.168, A:D.186, A:E.189 CA.4: 3 residues within 4Å: Chain A: D.112, D.187, E.189 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.112, A:D.187, A:D.187, A:E.189, H2O.55 CA.5: 5 residues within 4Å: Chain A: A.145, D.146, G.178, Q.180, D.182 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.146, A:G.178, A:D.182, H2O.175

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Elkins, P.A. et al., Structure of the C-terminally truncated human ProMMP9, a gelatin-binding matrix metalloproteinase. Acta Crystallogr.,Sect.D (2002)

Release Date

2002-07-03

Peptides

Matrix metalloproteinase-9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Matrix metalloproteinase-9