- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.40 Å
- Oligo State
- homo-45-mer
- Ligands
- 15 x A- A- A: 5'-R(*AP*AP*A)-3'(Non-covalent)
- 15 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.2: 4 residues within 4Å:- Ligands: PO4.5, PO4.8, PO4.11, PO4.14
No protein-ligand interaction detected (PLIP)PO4.5: 4 residues within 4Å:- Ligands: PO4.2, PO4.8, PO4.11, PO4.14
No protein-ligand interaction detected (PLIP)PO4.8: 4 residues within 4Å:- Ligands: PO4.2, PO4.5, PO4.11, PO4.14
No protein-ligand interaction detected (PLIP)PO4.11: 4 residues within 4Å:- Ligands: PO4.2, PO4.5, PO4.8, PO4.14
No protein-ligand interaction detected (PLIP)PO4.14: 4 residues within 4Å:- Ligands: PO4.2, PO4.5, PO4.8, PO4.11
No protein-ligand interaction detected (PLIP)PO4.17: 4 residues within 4Å:- Ligands: PO4.20, PO4.23, PO4.26, PO4.29
No protein-ligand interaction detected (PLIP)PO4.20: 4 residues within 4Å:- Ligands: PO4.17, PO4.23, PO4.26, PO4.29
No protein-ligand interaction detected (PLIP)PO4.23: 4 residues within 4Å:- Ligands: PO4.17, PO4.20, PO4.26, PO4.29
No protein-ligand interaction detected (PLIP)PO4.26: 4 residues within 4Å:- Ligands: PO4.17, PO4.20, PO4.23, PO4.29
No protein-ligand interaction detected (PLIP)PO4.29: 4 residues within 4Å:- Ligands: PO4.17, PO4.20, PO4.23, PO4.26
No protein-ligand interaction detected (PLIP)PO4.32: 4 residues within 4Å:- Ligands: PO4.35, PO4.38, PO4.41, PO4.44
No protein-ligand interaction detected (PLIP)PO4.35: 4 residues within 4Å:- Ligands: PO4.32, PO4.38, PO4.41, PO4.44
No protein-ligand interaction detected (PLIP)PO4.38: 4 residues within 4Å:- Ligands: PO4.32, PO4.35, PO4.41, PO4.44
No protein-ligand interaction detected (PLIP)PO4.41: 4 residues within 4Å:- Ligands: PO4.32, PO4.35, PO4.38, PO4.44
No protein-ligand interaction detected (PLIP)PO4.44: 4 residues within 4Å:- Ligands: PO4.32, PO4.35, PO4.38, PO4.41
No protein-ligand interaction detected (PLIP)- 15 x MG: MAGNESIUM ION(Non-covalent)
MG.3: 3 residues within 4Å:- Chain A: E.175
- Chain B: E.175
- Chain C: E.175
No protein-ligand interaction detected (PLIP)MG.6: 3 residues within 4Å:- Chain D: E.175
- Chain E: E.175
- Chain F: E.175
No protein-ligand interaction detected (PLIP)MG.9: 3 residues within 4Å:- Chain G: E.175
- Chain H: E.175
- Chain I: E.175
No protein-ligand interaction detected (PLIP)MG.12: 3 residues within 4Å:- Chain J: E.175
- Chain K: E.175
- Chain L: E.175
No protein-ligand interaction detected (PLIP)MG.15: 3 residues within 4Å:- Chain M: E.175
- Chain N: E.175
- Chain O: E.175
No protein-ligand interaction detected (PLIP)MG.18: 3 residues within 4Å:- Chain P: E.175
- Chain Q: E.175
- Chain R: E.175
No protein-ligand interaction detected (PLIP)MG.21: 3 residues within 4Å:- Chain S: E.175
- Chain T: E.175
- Chain U: E.175
No protein-ligand interaction detected (PLIP)MG.24: 3 residues within 4Å:- Chain V: E.175
- Chain W: E.175
- Chain X: E.175
No protein-ligand interaction detected (PLIP)MG.27: 3 residues within 4Å:- Chain 0: E.175
- Chain Y: E.175
- Chain Z: E.175
No protein-ligand interaction detected (PLIP)MG.30: 3 residues within 4Å:- Chain 1: E.175
- Chain 2: E.175
- Chain 3: E.175
No protein-ligand interaction detected (PLIP)MG.33: 3 residues within 4Å:- Chain 4: E.175
- Chain 5: E.175
- Chain 6: E.175
No protein-ligand interaction detected (PLIP)MG.36: 3 residues within 4Å:- Chain 7: E.175
- Chain 8: E.175
- Chain 9: E.175
No protein-ligand interaction detected (PLIP)MG.39: 3 residues within 4Å:- Chain a: E.175
- Chain b: E.175
- Chain c: E.175
No protein-ligand interaction detected (PLIP)MG.42: 3 residues within 4Å:- Chain d: E.175
- Chain e: E.175
- Chain f: E.175
No protein-ligand interaction detected (PLIP)MG.45: 3 residues within 4Å:- Chain g: E.175
- Chain h: E.175
- Chain i: E.175
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lucas, R.W. et al., The Structure of Tomato Aspermy Virus by X-Ray Crystallography. J.STRUCT.BIOL. (2002)
- Release Date
- 2002-11-27
- Peptides
- capsid protein: ABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789abcdefghi
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
AE
BF
CG
AH
BI
CJ
AK
BL
CM
AN
BO
CP
AQ
BR
CS
AT
BU
CV
AW
BX
CY
AZ
B0
C1
A2
B3
C4
A5
B6
C7
A8
B9
Ca
Ab
Bc
Cd
Ae
Bf
Cg
Ah
Bi
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.40 Å
- Oligo State
- homo-45-mer
- Ligands
- 15 x A- A- A: 5'-R(*AP*AP*A)-3'(Non-covalent)
- 15 x PO4: PHOSPHATE ION(Non-functional Binders)
- 15 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lucas, R.W. et al., The Structure of Tomato Aspermy Virus by X-Ray Crystallography. J.STRUCT.BIOL. (2002)
- Release Date
- 2002-11-27
- Peptides
- capsid protein: ABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789abcdefghi
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
AE
BF
CG
AH
BI
CJ
AK
BL
CM
AN
BO
CP
AQ
BR
CS
AT
BU
CV
AW
BX
CY
AZ
B0
C1
A2
B3
C4
A5
B6
C7
A8
B9
Ca
Ab
Bc
Cd
Ae
Bf
Cg
Ah
Bi
C