SMTL ID : 1lb6.1

TRAF6-CD40 Complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x LYS- GLN- GLU- PRO- GLN- GLU- ILE- ASP- PHE: CD40 antigen(Non-covalent)

LYS-GLN-GLU-PRO-GLN-GLU-ILE-ASP-PHE.1: 16 residues within 4Å: Chain A: R.46, F.64, H.66, E.102, M.104, L.110, L.111, A.112, P.122, K.123, G.124, F.125, G.126, Y.127, V.128, T.129 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:F.64, A:F.64, A:M.104, A:L.110, A:F.125, A:F.125, A:Y.127, A:Y.127, A:V.128 Hydrogen bonds: A:A.112, A:P.122, A:P.122, A:G.124, A:G.124, A:G.126, A:F.130 Water bridges: A:E.102, A:L.111, A:K.123 Salt bridges: A:K.123, A:K.123 pi-Stacking: A:F.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ye, H. et al., Distinct molecular mechanism for initiating TRAF6 signalling. Nature (2002)

Release Date

2002-07-31

Peptides

TNF receptor-associated factor 6: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TNF receptor-associated factor 6

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