SMTL ID : 1lcf.1

CRYSTAL STRUCTURE OF COPPER-AND OXALATE-SUBSTITUTED HUMAN LACTOFERRIN AT 2.0 ANGSTROMS RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: Q.110, F.135, N.137, F.152 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.110, A:Q.110, A:N.137

2 x CU: COPPER (II) ION(Non-covalent)

CU.2: 5 residues within 4Å: Chain A: D.60, Y.92, Y.192, H.253 Ligands: CO3.4 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.60, A:Y.92, A:Y.192, A:H.253 CU.3: 5 residues within 4Å: Chain A: D.395, Y.435, Y.528, H.597 Ligands: OXL.5 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.395, A:Y.435, A:Y.528, A:H.597

1 x CO3: CARBONATE ION(Non-functional Binders)

CO3.4: 10 residues within 4Å: Chain A: D.60, Y.92, T.117, R.121, T.122, A.123, G.124, Y.192, H.253 Ligands: CU.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.92, A:R.121, A:T.122, A:A.123

1 x OXL: OXALATE ION(Non-covalent)

OXL.5: 10 residues within 4Å: Chain A: D.395, Y.435, T.461, R.465, T.466, A.467, G.468, Y.528, H.597 Ligands: CU.3 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:T.461, A:T.461, A:T.461, A:A.467, A:G.468 Water bridges: A:D.395 Salt bridges: A:R.465, A:H.597

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smith, C.A. et al., Structure of copper- and oxalate-substituted human lactoferrin at 2.0 A resolution. Acta Crystallogr.,Sect.D (1994)

Release Date

1994-08-31

Peptides

LACTOFERRIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

LACTOFERRIN